RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 USP8P40818 1118 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 PIK3CAP42336 1068 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 SLC26A2P50443 739 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 STAT5BP51692 787 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 BPIFB4P59827 614 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 FMO1Q01740 532 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 CUL1Q13616 776 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 ZACNQ401N2 412 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 WDR44Q5JSH3 913 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 IER5Q5VY09 327 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 CDCA2Q69YH5 1023 aaPredicted RBP10.68□□□□□ -0.7
VPS25-202ENST00000589219 SND1Q7KZF4 910 aaKnown RBP eCLIP10.68□□□□□ -0.7
VPS25-202ENST00000589219 ZNF771Q7L3S4 317 aaPredicted RBP10.68□□□□□ -0.7
VPS25-202ENST00000589219 NOP9Q86U38 636 aaKnown RBP10.68□□□□□ -0.7
VPS25-202ENST00000589219 ZBTB8OSQ8IWT0 167 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 GSPT2Q8IYD1 628 aaKnown RBP10.68□□□□□ -0.7
VPS25-202ENST00000589219 MREGQ8N565 214 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 UBL4BQ8N7F7 174 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 ARRDC4Q8NCT1 418 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 NPLOC4Q8TAT6 608 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 WHAMMQ8TF30 809 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 KAT5Q92993 513 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 TMEM143Q96AN5 459 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 RPS6KC1Q96S38 1066 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 PCYT2Q99447 389 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 MMP19Q99542 508 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 MSTO1Q9BUK6 570 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 THAP2Q9H0W7 228 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 OSGEPQ9NPF4 335 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 TOPORSQ9NS56 1045 aaPredicted RBP10.68□□□□□ -0.7
VPS25-202ENST00000589219 RBAKQ9NYW8 714 aaPredicted RBP10.68□□□□□ -0.7
VPS25-202ENST00000589219 CTTNBP2NLQ9P2B4 639 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 UVRAGQ9P2Y5 699 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 TELO2Q9Y4R8 837 aa10.68□□□□□ -0.7
VPS25-202ENST00000589219 DNAJC25-GNG10A0A024R161 153 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 A0A0B4J269 797 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 GOLGA6BA6NDN3 693 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 K7ERI5 159 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 DNM1LO00429 736 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 RAD51CO43502 376 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 SORBS3O60504 671 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 ZMYND10O75800 440 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 HLA-DRAP01903 254 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 FTLP02792 175 aaPredicted RBP10.67□□□□□ -0.7
VPS25-202ENST00000589219 CYP1A2P05177 515 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 MYBL1P10243 752 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 CYP11B1P15538 503 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 CHRNB2P17787 502 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 TBXAS1P24557 533 aaPredicted RBP10.67□□□□□ -0.7
VPS25-202ENST00000589219 CYP2C19P33261 490 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 TCF7P36402 384 aaPredicted RBP10.67□□□□□ -0.7
VPS25-202ENST00000589219 CAPSQ13938 189 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 KCTD2Q14681 263 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 SURF1Q15526 300 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 ALS2CLQ60I27 953 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 TRIM72Q6ZMU5 477 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 PLPPR4Q7Z2D5 763 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 PALB2Q86YC2 1186 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 BRSK2Q8IWQ3 736 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 CCDC26Q8TAB7 109 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 ATP8B4Q8TF62 1192 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 HDAC7Q8WUI4 952 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 RUFY1Q96T51 708 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 MRPL4Q9BYD3 311 aaKnown RBP10.67□□□□□ -0.7
VPS25-202ENST00000589219 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.67□□□□□ -0.7
VPS25-202ENST00000589219 TAS2R14Q9NYV8 317 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 DOCK5Q9H7D0 1870 aa10.67□□□□□ -0.7
VPS25-202ENST00000589219 PLXNA1Q9UIW2 1896 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 ASB14A6NK59 587 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 BHMG1C9JSJ3 638 aaPredicted RBP10.66□□□□□ -0.7
VPS25-202ENST00000589219 GOLGA8KD6RF30 607 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 KRIT1O00522 736 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 NOP56O00567 594 aaKnown RBP10.66□□□□□ -0.7
VPS25-202ENST00000589219 CYP26A1O43174 497 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 SEPT4O43236 478 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 OPA1O60313 960 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 HSF2BPO75031 334 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 IGHA2P01877 340 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 CYBAP13498 195 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 SYN1P17600 705 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 CTNNA2P26232 953 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 MAGEA10P43363 369 aaPredicted RBP10.66□□□□□ -0.7
VPS25-202ENST00000589219 NLRP11P59045 1033 aaKnown RBP10.66□□□□□ -0.7
VPS25-202ENST00000589219 SLC7A5Q01650 507 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 GUCY2DQ02846 1103 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 PRPF4BQ13523 1007 aaKnown RBP10.66□□□□□ -0.7
VPS25-202ENST00000589219 MXD4Q14582 209 aaPredicted RBP10.66□□□□□ -0.7
VPS25-202ENST00000589219 LRRC26Q2I0M4 334 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 CLEC16AQ2KHT3 1053 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 CELF3Q5SZQ8 465 aaKnown RBP10.66□□□□□ -0.7
VPS25-202ENST00000589219 TAF3Q5VWG9 929 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 GPR153Q6NV75 609 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 MAATS1Q7Z4T9 603 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 SLC47A2Q86VL8 602 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 DNAAF5Q86Y56 855 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 ZNF564Q8TBZ8 553 aaPredicted RBP10.66□□□□□ -0.7
VPS25-202ENST00000589219 ZNF653Q96CK0 615 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 PKNOX2Q96KN3 472 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 FGD4Q96M96 766 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 RUNDC3BQ96NL0 473 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms