RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 CNTN3Q9P232 1028 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 PCDHB6Q9Y5E3 794 aa16.44■□□□□ 0.22
VAPA-209ENST00000585042 SPTBN4Q9H254 2564 aa16.43■□□□□ 0.22
VAPA-209ENST00000585042 ECI2O75521 394 aa16.43■□□□□ 0.22
VAPA-209ENST00000585042 ATF2P15336 505 aa16.43■□□□□ 0.22
VAPA-209ENST00000585042 IGFBP6P24592 240 aaPredicted RBP16.43■□□□□ 0.22
VAPA-209ENST00000585042 SMTNP53814 917 aa16.43■□□□□ 0.22
VAPA-209ENST00000585042 SOX4Q06945 474 aaPredicted RBP16.43■□□□□ 0.22
VAPA-209ENST00000585042 MAPK7Q13164 816 aa16.43■□□□□ 0.22
VAPA-209ENST00000585042 NBR1Q14596 966 aa16.43■□□□□ 0.22
VAPA-209ENST00000585042 RILPL1Q5EBL4 403 aa16.43■□□□□ 0.22
VAPA-209ENST00000585042 HYIQ5T013 277 aa16.43■□□□□ 0.22
VAPA-209ENST00000585042 TAS1R3Q7RTX0 852 aa16.43■□□□□ 0.22
VAPA-209ENST00000585042 ERMP1Q7Z2K6 904 aa16.43■□□□□ 0.22
VAPA-209ENST00000585042 NPAS3Q8IXF0 933 aa16.43■□□□□ 0.22
VAPA-209ENST00000585042 TCEAL8Q8IYN2 117 aa16.43■□□□□ 0.22
VAPA-209ENST00000585042 C3orf58Q8NDZ4 430 aa16.43■□□□□ 0.22
VAPA-209ENST00000585042 TARS2Q9BW92 718 aaKnown RBP16.43■□□□□ 0.22
VAPA-209ENST00000585042 GOLGA2P5Q9HBQ8 144 aa16.43■□□□□ 0.22
VAPA-209ENST00000585042 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.43■□□□□ 0.22
VAPA-209ENST00000585042 MRPS23Q9Y3D9 190 aaKnown RBP16.43■□□□□ 0.22
VAPA-209ENST00000585042 DMDP11532 3685 aa16.43■□□□□ 0.22
VAPA-209ENST00000585042 NOTCH4Q99466 2003 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 PODXLO00592 558 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 ABLIM1O14639 778 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 ZNF197O14709 1029 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 TOM1L1O75674 476 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 LRG1P02750 347 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 RHOP08100 348 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 SP9P0CG40 484 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 SCP2P22307 547 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 BRCC3P46736 316 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 ROR1Q01973 937 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 STRN3Q13033 797 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 SNW1Q13573 536 aaKnown RBP16.42■□□□□ 0.22
VAPA-209ENST00000585042 MLF2Q15773 248 aaPredicted RBP16.42■□□□□ 0.22
VAPA-209ENST00000585042 ZNF528Q3MIS6 628 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 SPECC1Q5M775 1068 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 VARS2Q5ST30 1063 aaKnown RBP16.42■□□□□ 0.22
VAPA-209ENST00000585042 ZPBP2Q6X784 338 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 CEP120Q8N960 986 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 KCNN1Q92952 543 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 SUSD3Q96L08 255 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 ZMAT2Q96NC0 199 aaKnown RBP16.42■□□□□ 0.22
VAPA-209ENST00000585042 KIF2CQ99661 725 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 MMTAG2Q9BU76 263 aaKnown RBP16.42■□□□□ 0.22
VAPA-209ENST00000585042 OXCT2Q9BYC2 517 aaPredicted RBP16.42■□□□□ 0.22
VAPA-209ENST00000585042 BCO2Q9BYV7 579 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 PLEKHA5Q9HAU0 1116 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 HCFC1R1Q9NWW0 138 aa16.42■□□□□ 0.22
VAPA-209ENST00000585042 MYH15Q9Y2K3 1946 aa16.41■□□□□ 0.22
VAPA-209ENST00000585042 H0YCG3 227 aa16.41■□□□□ 0.22
VAPA-209ENST00000585042 NCAM2O15394 837 aa16.41■□□□□ 0.22
VAPA-209ENST00000585042 SLC26A4O43511 780 aa16.41■□□□□ 0.22
VAPA-209ENST00000585042 PLS3P13797 630 aa16.41■□□□□ 0.22
VAPA-209ENST00000585042 OSTNP61366 133 aa16.41■□□□□ 0.22
VAPA-209ENST00000585042 IL17AQ16552 155 aa16.41■□□□□ 0.22
VAPA-209ENST00000585042 SYT2Q8N9I0 419 aaPredicted RBP16.41■□□□□ 0.22
VAPA-209ENST00000585042 APPL2Q8NEU8 664 aa16.41■□□□□ 0.22
VAPA-209ENST00000585042 KCNG4Q8TDN1 519 aa16.41■□□□□ 0.22
VAPA-209ENST00000585042 ELSPBP1Q96BH3 223 aa16.41■□□□□ 0.22
VAPA-209ENST00000585042 TSPAN18Q96SJ8 248 aa16.41■□□□□ 0.22
VAPA-209ENST00000585042 RUSC1Q9BVN2 902 aa16.41■□□□□ 0.22
VAPA-209ENST00000585042 FBXO4Q9UKT5 387 aa16.41■□□□□ 0.22
VAPA-209ENST00000585042 NUB1Q9Y5A7 615 aa16.41■□□□□ 0.22
VAPA-209ENST00000585042 ZNF292O60281 2723 aa16.41■□□□□ 0.22
VAPA-209ENST00000585042 GVINP1Q7Z2Y8 2422 aa16.4■□□□□ 0.22
VAPA-209ENST00000585042 WDR27A2RRH5 827 aa16.4■□□□□ 0.22
VAPA-209ENST00000585042 I3L4J1 428 aa16.4■□□□□ 0.22
VAPA-209ENST00000585042 PRRG1O14668 218 aa16.4■□□□□ 0.22
VAPA-209ENST00000585042 SLC16A4O15374 487 aa16.4■□□□□ 0.22
VAPA-209ENST00000585042 GLULP15104 373 aa16.4■□□□□ 0.22
VAPA-209ENST00000585042 ID4P47928 161 aa16.4■□□□□ 0.22
VAPA-209ENST00000585042 ATP2C1P98194 919 aaPredicted RBP16.4■□□□□ 0.22
VAPA-209ENST00000585042 KYAT1Q16773 422 aa16.4■□□□□ 0.22
VAPA-209ENST00000585042 ZBTB41Q5SVQ8 909 aa16.4■□□□□ 0.22
VAPA-209ENST00000585042 ARL6IP4Q66PJ3 421 aaKnown RBP16.4■□□□□ 0.22
VAPA-209ENST00000585042 TMEM161BQ8NDZ6 487 aa16.4■□□□□ 0.22
VAPA-209ENST00000585042 FOXQ1Q9C009 403 aa16.4■□□□□ 0.22
VAPA-209ENST00000585042 MRPS17Q9Y2R5 130 aaKnown RBP16.4■□□□□ 0.22
VAPA-209ENST00000585042 CITO14578 2027 aa16.4■□□□□ 0.22
VAPA-209ENST00000585042 WDR87Q6ZQQ6 2873 aa16.4■□□□□ 0.22
VAPA-209ENST00000585042 FAM170BA6NMN3 283 aa16.39■□□□□ 0.21
VAPA-209ENST00000585042 PP2D1A8MPX8 630 aa16.39■□□□□ 0.21
VAPA-209ENST00000585042 CLDN3O15551 220 aa16.39■□□□□ 0.21
VAPA-209ENST00000585042 CDC25AP30304 524 aa16.39■□□□□ 0.21
VAPA-209ENST00000585042 RPS9P46781 194 aaKnown RBP16.39■□□□□ 0.21
VAPA-209ENST00000585042 MCL1Q07820 350 aa16.39■□□□□ 0.21
VAPA-209ENST00000585042 NOLC1Q14978 699 aaKnown RBP eCLIP16.39■□□□□ 0.21
VAPA-209ENST00000585042 SLC10A6Q3KNW5 377 aa16.39■□□□□ 0.21
VAPA-209ENST00000585042 CTXN3Q4LDR2 81 aa16.39■□□□□ 0.21
VAPA-209ENST00000585042 KCNK18Q7Z418 384 aa16.39■□□□□ 0.21
VAPA-209ENST00000585042 ELMOD1Q8N336 334 aa16.39■□□□□ 0.21
VAPA-209ENST00000585042 LEMD2Q8NC56 503 aa16.39■□□□□ 0.21
VAPA-209ENST00000585042 DNASE1L2Q92874 299 aa16.39■□□□□ 0.21
VAPA-209ENST00000585042 CLDN23Q96B33 292 aa16.39■□□□□ 0.21
VAPA-209ENST00000585042 MCRS1Q96EZ8 462 aa16.39■□□□□ 0.21
VAPA-209ENST00000585042 KXD1Q9BQD3 176 aa16.39■□□□□ 0.21
VAPA-209ENST00000585042 CYP4F11Q9HBI6 524 aa16.39■□□□□ 0.21
VAPA-209ENST00000585042 TRPV5Q9NQA5 729 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms