RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 DEFB118Q96PH6 123 aa15.06■□□□□ 0
UBBP4-202ENST00000584755 TSPAN18Q96SJ8 248 aa15.06■□□□□ 0
UBBP4-202ENST00000584755 TRAIPQ9BWF2 469 aa15.06■□□□□ 0
UBBP4-202ENST00000584755 XYLT2Q9H1B5 865 aa15.06■□□□□ 0
UBBP4-202ENST00000584755 DEF6Q9H4E7 631 aa15.06■□□□□ 0
UBBP4-202ENST00000584755 VRTNQ9H8Y1 702 aa15.06■□□□□ 0
UBBP4-202ENST00000584755 ERVK-5Q9HDB9 667 aa15.06■□□□□ 0
UBBP4-202ENST00000584755 CNTN3Q9P232 1028 aa15.06■□□□□ 0
UBBP4-202ENST00000584755 SIX4Q9UIU6 781 aa15.06■□□□□ 0
UBBP4-202ENST00000584755 NENFQ9UMX5 172 aa15.06■□□□□ 0
UBBP4-202ENST00000584755 KIF2AO00139 706 aaPredicted RBP15.05■□□□□ -0
UBBP4-202ENST00000584755 TULP1O00294 542 aaPredicted RBP15.05■□□□□ -0
UBBP4-202ENST00000584755 IPO7O95373 1038 aaKnown RBP15.05■□□□□ -0
UBBP4-202ENST00000584755 TUBB4AP04350 444 aa15.05■□□□□ -0
UBBP4-202ENST00000584755 TBXAS1P24557 533 aaPredicted RBP15.05■□□□□ -0
UBBP4-202ENST00000584755 CUL2Q13617 745 aa15.05■□□□□ -0
UBBP4-202ENST00000584755 TMEM132DQ14C87 1099 aa15.05■□□□□ -0
UBBP4-202ENST00000584755 PTPN14Q15678 1187 aa15.05■□□□□ -0
UBBP4-202ENST00000584755 ZBTB6Q15916 424 aa15.05■□□□□ -0
UBBP4-202ENST00000584755 SCARA3Q6AZY7 606 aa15.05■□□□□ -0
UBBP4-202ENST00000584755 TRAF7Q6Q0C0 670 aa15.05■□□□□ -0
UBBP4-202ENST00000584755 CTU1Q7Z7A3 348 aaKnown RBP15.05■□□□□ -0
UBBP4-202ENST00000584755 GPIHBP1Q8IV16 184 aa15.05■□□□□ -0
UBBP4-202ENST00000584755 USP38Q8NB14 1042 aa15.05■□□□□ -0
UBBP4-202ENST00000584755 SMG8Q8ND04 991 aaKnown RBP15.05■□□□□ -0
UBBP4-202ENST00000584755 C16orf45Q96MC5 204 aaPredicted RBP15.05■□□□□ -0
UBBP4-202ENST00000584755 IMPG2Q9BZV3 1241 aa15.05■□□□□ -0
UBBP4-202ENST00000584755 TRIM6Q9C030 488 aaPredicted RBP15.05■□□□□ -0
UBBP4-202ENST00000584755 CRISPLD2Q9H0B8 497 aa15.05■□□□□ -0
UBBP4-202ENST00000584755 RNF208Q9H0X6 261 aa15.05■□□□□ -0
UBBP4-202ENST00000584755 TRPV6Q9H1D0 765 aa15.05■□□□□ -0
UBBP4-202ENST00000584755 NXF3Q9H4D5 531 aaKnown RBP15.05■□□□□ -0
UBBP4-202ENST00000584755 AGO3Q9H9G7 860 aaKnown RBP15.05■□□□□ -0
UBBP4-202ENST00000584755 CNTN6Q9UQ52 1028 aa15.05■□□□□ -0
UBBP4-202ENST00000584755 NUB1Q9Y5A7 615 aa15.05■□□□□ -0
UBBP4-202ENST00000584755 PDCD11Q14690 1871 aaKnown RBP15.04■□□□□ -0
UBBP4-202ENST00000584755 A0A087X0T9 212 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 A0A0U1RQJ8 604 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 RECQL4O94761 1208 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 STAU1O95793 577 aaKnown RBP15.04■□□□□ -0
UBBP4-202ENST00000584755 FAM228BP0C875 321 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 HSPA8P11142 646 aaKnown RBP15.04■□□□□ -0
UBBP4-202ENST00000584755 CKBP12277 381 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 ACO1P21399 889 aaKnown RBP15.04■□□□□ -0
UBBP4-202ENST00000584755 VAV2P52735 878 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 YARSP54577 528 aaKnown RBP15.04■□□□□ -0
UBBP4-202ENST00000584755 MYL6P60660 151 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 TRPC3Q13507 836 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 DSC3Q14574 896 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 BMS1Q14692 1282 aaKnown RBP15.04■□□□□ -0
UBBP4-202ENST00000584755 LPIN1Q14693 890 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 SPA17Q15506 151 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 ZNF618Q5T7W0 954 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 SPOPLQ6IQ16 392 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 UBR7Q8N806 425 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 SLC30A5Q8TAD4 765 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 ATRIPQ8WXE1 791 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.04■□□□□ -02e-6■■■■■ 59.5
UBBP4-202ENST00000584755 ITGA11Q9UKX5 1188 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 HES2Q9Y543 173 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 IPPQ9Y573 584 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 ATP8B3O60423 1300 aa15.04■□□□□ -0
UBBP4-202ENST00000584755 BRCA2P51587 3418 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 PJA2O43164 708 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 CD4P01730 458 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 TNNT1P13805 278 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 KCNE1P15382 129 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 ATICP31939 592 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 CYP27A1Q02318 531 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 GFPT1Q06210 699 aaPredicted RBP15.03■□□□□ -0
UBBP4-202ENST00000584755 C10orf76Q5T2E6 689 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 TWF2Q6IBS0 349 aaKnown RBP15.03■□□□□ -0
UBBP4-202ENST00000584755 FBXO46Q6PJ61 603 aaPredicted RBP15.03■□□□□ -0
UBBP4-202ENST00000584755 VPS36Q86VN1 386 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 FAM126BQ8IXS8 530 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 CAGE1Q8TC20 777 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 ELMO3Q96BJ8 720 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 ZNF333Q96JL9 665 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 ZMAT2Q96NC0 199 aaKnown RBP15.03■□□□□ -0
UBBP4-202ENST00000584755 ARID3AQ99856 593 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 OSBPL7Q9BZF2 842 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 NIF3L1Q9GZT8 377 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 ADAMTS1Q9UHI8 967 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 PADI3Q9ULW8 664 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 PCDHA13Q9Y5I0 950 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 CEP350Q5VT06 3117 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 UMODL1Q5DID0 1318 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 DNAH12Q6ZR08 3092 aa15.03■□□□□ -0
UBBP4-202ENST00000584755 RCCD1A6NED2 376 aa15.02■□□□□ -0
UBBP4-202ENST00000584755 DDX3XO00571 662 aaKnown RBP eCLIP15.02■□□□□ -0
UBBP4-202ENST00000584755 OFD1O75665 1012 aa15.02■□□□□ -0
UBBP4-202ENST00000584755 GHRP10912 638 aa15.02■□□□□ -0
UBBP4-202ENST00000584755 CD52P31358 61 aa15.02■□□□□ -0
UBBP4-202ENST00000584755 MNX1P50219 401 aaPredicted RBP15.02■□□□□ -0
UBBP4-202ENST00000584755 ETF1P62495 437 aaKnown RBP15.02■□□□□ -0
UBBP4-202ENST00000584755 MRPL10Q7Z7H8 261 aaKnown RBP15.02■□□□□ -0
UBBP4-202ENST00000584755 EPS8L1Q8TE68 723 aa15.02■□□□□ -0
UBBP4-202ENST00000584755 ARMC5Q96C12 935 aa15.02■□□□□ -0
UBBP4-202ENST00000584755 KIF12Q96FN5 646 aa15.02■□□□□ -0
UBBP4-202ENST00000584755 IFIH1Q9BYX4 1025 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms