RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 TYK2P29597 1187 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 PGM1P36871 562 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 AP3M2P53677 418 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 TNFAIP2Q03169 654 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 PWP2Q15269 919 aaKnown RBP11.51□□□□□ -0.57
RNF43-203ENST00000577716 FAM153CQ494X1 144 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 C3orf67Q6ZVT6 689 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 AGGF1Q8N302 714 aaeCLIP11.51□□□□□ -0.57
RNF43-203ENST00000577716 SLC4A9Q96Q91 983 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 FAM96AQ9H5X1 160 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 CD248Q9HCU0 757 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 RAB6BQ9NRW1 208 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 NDE1Q9NXR1 346 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 FAM153AQ9UHL3 310 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 IGF2BP3O00425 579 aaKnown RBP eCLIP11.5□□□□□ -0.57
RNF43-203ENST00000577716 OSBPP22059 807 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 COPS2P61201 443 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 PSMC6P62333 389 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 OCRLQ01968 901 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 KDSRQ06136 332 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 ARL13BQ3SXY8 428 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 VPS39Q96JC1 886 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 CBWD1Q9BRT8 395 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 KIFC3Q9BVG8 833 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 TSSK1BQ9BXA7 367 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 UBN1Q9NPG3 1134 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 BFARQ9NZS9 450 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 SPATA31A5Q5VU36 1347 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 SPATA31A7Q8IWB4 1347 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 SPDYE16A6NNV3 312 aaPredicted RBP11.5□□□□□ -0.57
RNF43-203ENST00000577716 KPNA7A9QM74 516 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 F8VZ95 297 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 CCDC22O60826 627 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 RARGP13631 454 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 CHRNA5P30532 468 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 STAT5BP51692 787 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 AP2B1P63010 937 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 SPDYE2Q495Y8 402 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 RABGAP1LQ5R372 815 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 RGS9BPQ6ZS82 235 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 MYLK4Q86YV6 388 aaPredicted RBP11.5□□□□□ -0.57
RNF43-203ENST00000577716 RYBPQ8N488 228 aaPredicted RBP11.5□□□□□ -0.57
RNF43-203ENST00000577716 AENQ8WTP8 325 aaKnown RBP11.5□□□□□ -0.57
RNF43-203ENST00000577716 AGBL1Q96MI9 1066 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 TRIM56Q9BRZ2 755 aaKnown RBP11.5□□□□□ -0.57
RNF43-203ENST00000577716 CENPKQ9BS16 269 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 EHD4Q9H223 541 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 TOPORSQ9NS56 1045 aaPredicted RBP11.5□□□□□ -0.57
RNF43-203ENST00000577716 FNDC3AQ9Y2H6 1198 aaKnown RBP11.5□□□□□ -0.57
RNF43-203ENST00000577716 COL5A2P05997 1499 aaPredicted RBP11.5□□□□□ -0.57
RNF43-203ENST00000577716 SGPL1O95470 568 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 AARSP49588 968 aaKnown RBP eCLIP11.5□□□□□ -0.57
RNF43-203ENST00000577716 EFNA5P52803 228 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 HMGCS2P54868 508 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 ERVK-9P63128 1117 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 C2CD6Q53TS8 623 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 DPY19L2Q6NUT2 758 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 C3orf62Q6ZUJ4 267 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 CBWD2Q8IUF1 395 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 ATP8B4Q8TF62 1192 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 ALKBH8Q96BT7 664 aaKnown RBP11.5□□□□□ -0.57
RNF43-203ENST00000577716 SERPINB12Q96P63 405 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 CHMP2BQ9UQN3 213 aa11.5□□□□□ -0.57
RNF43-203ENST00000577716 WDR46O15213 610 aaKnown RBP11.49□□□□□ -0.57
RNF43-203ENST00000577716 CREB3O43889 395 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 CST8O60676 142 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 SLC4A1P02730 911 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 RBP3P10745 1247 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 SREBF1P36956 1147 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 MON2Q7Z3U7 1717 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 CCNYL1Q8N7R7 359 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 TSEN2Q8NCE0 465 aaKnown RBP11.49□□□□□ -0.57
RNF43-203ENST00000577716 SLC26A7Q8TE54 656 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 ATP6V1E2Q96A05 226 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 GJD4Q96KN9 370 aaPredicted RBP11.49□□□□□ -0.57
RNF43-203ENST00000577716 UPF3AQ9H1J1 476 aaKnown RBP11.49□□□□□ -0.57
RNF43-203ENST00000577716 NOD2Q9HC29 1040 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 PDGFRAP16234 1089 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 NFX1Q12986 1120 aaKnown RBP11.49□□□□□ -0.57
RNF43-203ENST00000577716 PIGHQ14442 188 aaPredicted RBP11.49□□□□□ -0.57
RNF43-203ENST00000577716 KIF22Q14807 665 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 TMCO4Q5TGY1 634 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 RWDD4Q6NW29 188 aaKnown RBP11.49□□□□□ -0.57
RNF43-203ENST00000577716 KCNK18Q7Z418 384 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 BBS5Q8N3I7 341 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 C3orf20Q8ND61 904 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 RANBP17Q9H2T7 1088 aaKnown RBP11.49□□□□□ -0.57
RNF43-203ENST00000577716 GPRC5CQ9NQ84 441 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 MARCOQ9UEW3 520 aaPredicted RBP11.49□□□□□ -0.57
RNF43-203ENST00000577716 BAG5Q9UL15 447 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 ZBTB12Q9Y330 459 aaPredicted RBP11.49□□□□□ -0.57
RNF43-203ENST00000577716 WTIPA6NIX2 430 aaPredicted RBP11.49□□□□□ -0.57
RNF43-203ENST00000577716 CCND1P24385 295 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 CASP2P42575 452 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 MTMR2Q13614 643 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 DALRD3Q5D0E6 543 aaKnown RBP11.49□□□□□ -0.57
RNF43-203ENST00000577716 ACAD10Q6JQN1 1059 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 WDR59Q6PJI9 974 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 LONP2Q86WA8 852 aa11.49□□□□□ -0.57
RNF43-203ENST00000577716 CDKL3Q8IVW4 592 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms