RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 ATP8B3O60423 1300 aa16.29■□□□□ 0.2
IFT20-204ENST00000577498 OFD1O75665 1012 aa16.29■□□□□ 0.2
IFT20-204ENST00000577498 ATICP31939 592 aa16.29■□□□□ 0.2
IFT20-204ENST00000577498 CDK7P50613 346 aa16.29■□□□□ 0.2
IFT20-204ENST00000577498 PTK2Q05397 1052 aa16.29■□□□□ 0.2
IFT20-204ENST00000577498 MTFR1Q15390 333 aa16.29■□□□□ 0.2
IFT20-204ENST00000577498 SLC18A3Q16572 532 aa16.29■□□□□ 0.2
IFT20-204ENST00000577498 C10orf76Q5T2E6 689 aa16.29■□□□□ 0.2
IFT20-204ENST00000577498 TWF2Q6IBS0 349 aaKnown RBP16.29■□□□□ 0.2
IFT20-204ENST00000577498 FBXO46Q6PJ61 603 aaPredicted RBP16.29■□□□□ 0.2
IFT20-204ENST00000577498 ALKAL1Q6UXT8 129 aa16.29■□□□□ 0.2
IFT20-204ENST00000577498 FAM43BQ6ZT52 329 aaPredicted RBP16.29■□□□□ 0.2
IFT20-204ENST00000577498 ZNF571Q7Z3V5 609 aaPredicted RBP16.29■□□□□ 0.2
IFT20-204ENST00000577498 HACE1Q8IYU2 909 aa16.29■□□□□ 0.2
IFT20-204ENST00000577498 SNTG2Q9NY99 539 aa16.29■□□□□ 0.2
IFT20-204ENST00000577498 CNTN3Q9P232 1028 aa16.29■□□□□ 0.2
IFT20-204ENST00000577498 ITGA11Q9UKX5 1188 aa16.29■□□□□ 0.2
IFT20-204ENST00000577498 RECQL4O94761 1208 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 HSPA8P11142 646 aaKnown RBP16.28■□□□□ 0.2
IFT20-204ENST00000577498 VAV2P52735 878 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 MYL6P60660 151 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 PAK2Q13177 524 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 CUL2Q13617 745 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 BMS1Q14692 1282 aaKnown RBP16.28■□□□□ 0.2
IFT20-204ENST00000577498 PKN2Q16513 984 aaKnown RBP16.28■□□□□ 0.2
IFT20-204ENST00000577498 ARHGAP29Q52LW3 1261 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 XKR4Q5GH76 650 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 KIAA1328Q86T90 577 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 CAGE1Q8TC20 777 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 KAT5Q92993 513 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 SYT11Q9BT88 431 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 TRAIPQ9BWF2 469 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 NIF3L1Q9GZT8 377 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 TRPV6Q9H1D0 765 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 NXF3Q9H4D5 531 aaKnown RBP16.28■□□□□ 0.2
IFT20-204ENST00000577498 VRTNQ9H8Y1 702 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 APOBEC3GQ9HC16 384 aaKnown RBP16.28■□□□□ 0.2
IFT20-204ENST00000577498 SIX4Q9UIU6 781 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 IPPQ9Y573 584 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 PCDHA13Q9Y5I0 950 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.28■□□□□ 0.2
IFT20-204ENST00000577498 CITO14578 2027 aa16.28■□□□□ 0.2
IFT20-204ENST00000577498 ZNF263O14978 683 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 STAU1O95793 577 aaKnown RBP16.27■□□□□ 0.2
IFT20-204ENST00000577498 CST3P01034 146 aaPredicted RBP16.27■□□□□ 0.2
IFT20-204ENST00000577498 PNMA6AP0CW24 399 aaPredicted RBP16.27■□□□□ 0.2
IFT20-204ENST00000577498 CKBP12277 381 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 KCNE1P15382 129 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 ZSCAN20P17040 1043 aaPredicted RBP16.27■□□□□ 0.2
IFT20-204ENST00000577498 ARHGAP25P42331 645 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 MAGEA1P43355 309 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 RAB27AP51159 221 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 BPIFB4P59827 614 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 RBP5P82980 135 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 LPIN1Q14693 890 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 ZNF699Q32M78 642 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 ZNF618Q5T7W0 954 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 C1orf127Q8N9H9 656 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 SMG8Q8ND04 991 aaKnown RBP16.27■□□□□ 0.2
IFT20-204ENST00000577498 ARMC5Q96C12 935 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 KIF12Q96FN5 646 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 ZNF333Q96JL9 665 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 C16orf45Q96MC5 204 aaPredicted RBP16.27■□□□□ 0.2
IFT20-204ENST00000577498 IFIH1Q9BYX4 1025 aaKnown RBP16.27■□□□□ 0.2
IFT20-204ENST00000577498 TSGA10Q9BZW7 698 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 CRISPLD2Q9H0B8 497 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 XYLT2Q9H1B5 865 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 FAM124BQ9H5Z6 455 aaPredicted RBP16.27■□□□□ 0.2
IFT20-204ENST00000577498 AGO3Q9H9G7 860 aaKnown RBP16.27■□□□□ 0.2
IFT20-204ENST00000577498 PADI3Q9ULW8 664 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 CNTN6Q9UQ52 1028 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 NUB1Q9Y5A7 615 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 PCDHB2Q9Y5E7 798 aa16.27■□□□□ 0.2
IFT20-204ENST00000577498 XPOTO43592 962 aaKnown RBP16.26■□□□□ 0.19
IFT20-204ENST00000577498 TNNT1P13805 278 aa16.26■□□□□ 0.19
IFT20-204ENST00000577498 YWHAEP62258 255 aaKnown RBP16.26■□□□□ 0.19
IFT20-204ENST00000577498 CYP27A1Q02318 531 aa16.26■□□□□ 0.19
IFT20-204ENST00000577498 GFPT1Q06210 699 aaPredicted RBP16.26■□□□□ 0.19
IFT20-204ENST00000577498 NFX1Q12986 1120 aaKnown RBP16.26■□□□□ 0.19
IFT20-204ENST00000577498 BFSP2Q13515 415 aa16.26■□□□□ 0.19
IFT20-204ENST00000577498 DSC3Q14574 896 aa16.26■□□□□ 0.19
IFT20-204ENST00000577498 ZBTB6Q15916 424 aa16.26■□□□□ 0.19
IFT20-204ENST00000577498 SPOPLQ6IQ16 392 aa16.26■□□□□ 0.19
IFT20-204ENST00000577498 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.26■□□□□ 0.19
IFT20-204ENST00000577498 MRPL10Q7Z7H8 261 aaKnown RBP16.26■□□□□ 0.19
IFT20-204ENST00000577498 GPIHBP1Q8IV16 184 aa16.26■□□□□ 0.19
IFT20-204ENST00000577498 FAM126BQ8IXS8 530 aa16.26■□□□□ 0.19
IFT20-204ENST00000577498 UBR7Q8N806 425 aa16.26■□□□□ 0.19
IFT20-204ENST00000577498 BEST2Q8NFU1 509 aa16.26■□□□□ 0.19
IFT20-204ENST00000577498 CXorf38Q8TB03 319 aa16.26■□□□□ 0.19
IFT20-204ENST00000577498 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.26■□□□□ 0.19
IFT20-204ENST00000577498 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.26■□□□□ 0.19
IFT20-204ENST00000577498 DPP3Q9NY33 737 aa16.26■□□□□ 0.19
IFT20-204ENST00000577498 ADAMTS1Q9UHI8 967 aa16.26■□□□□ 0.19
IFT20-204ENST00000577498 UBQLN1Q9UMX0 589 aaKnown RBP16.26■□□□□ 0.19
IFT20-204ENST00000577498 NENFQ9UMX5 172 aa16.26■□□□□ 0.19
IFT20-204ENST00000577498 R3HCC1Q9Y3T6 440 aaKnown RBP16.26■□□□□ 0.19
IFT20-204ENST00000577498 A0A087X0T9 212 aa16.25■□□□□ 0.19
IFT20-204ENST00000577498 PJA2O43164 708 aa16.25■□□□□ 0.19
IFT20-204ENST00000577498 CYP26A1O43174 497 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms