RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 IKZF4Q9H2S9 585 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 CD320Q9NPF0 282 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 USP25Q9UHP3 1055 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 AGO2Q9UKV8 859 aaKnown RBP12.13□□□□□ -0.47
SMG6-206ENST00000570668 UBQLN1Q9UMX0 589 aaKnown RBP12.13□□□□□ -0.47
SMG6-206ENST00000570668 VWA8A3KMH1 1905 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 A0A1B0GVL5 298 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 PVALEFA0A1B0GWK0 134 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 A0A1W2PQ27 194 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 A0A1W2PQ64 194 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 A0A1W2PQD8 194 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 C19orf67A6NJJ6 358 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 LACTBL1A8MY62 500 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 PRPF6O94906 941 aaKnown RBP12.12□□□□□ -0.47
SMG6-206ENST00000570668 PFKFB1P16118 471 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 CYP3A5P20815 502 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 ACOT2P49753 483 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 ITIH3Q06033 890 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 FAM26FQ5R3K3 315 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 PDXDC1Q6P996 788 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 STXBP4Q6ZWJ1 553 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 CEP57L1Q8IYX8 460 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 SYCP3Q8IZU3 236 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 LNX1Q8TBB1 728 aaPredicted RBP12.12□□□□□ -0.47
SMG6-206ENST00000570668 POMGNT1Q8WZA1 660 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 KIF12Q96FN5 646 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 POP1Q99575 1024 aaKnown RBP12.12□□□□□ -0.47
SMG6-206ENST00000570668 ADAM7Q9H2U9 754 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 ASB7Q9H672 318 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 TMEM206Q9H813 350 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 TUBGCP4Q9UGJ1 667 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 SERTAD1Q9UHV2 236 aa12.12□□□□□ -0.47
SMG6-206ENST00000570668 EIF3DO15371 548 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMG6-206ENST00000570668 XPOTO43592 962 aaKnown RBP12.11□□□□□ -0.47
SMG6-206ENST00000570668 GLUD1P00367 558 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 GARTP22102 1010 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 CASP1P29466 404 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 LRPAP1P30533 357 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 AFMP43652 599 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 BRCC3P46736 316 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 SPAG1Q07617 926 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 CUL4BQ13620 913 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 CBX2Q14781 532 aaPredicted RBP12.11□□□□□ -0.47
SMG6-206ENST00000570668 PSMD5Q16401 504 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 CES5AQ6NT32 575 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 LILRA6Q6PI73 481 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 PRSS55Q6UWB4 352 aaPredicted RBP12.11□□□□□ -0.47
SMG6-206ENST00000570668 CRELD2Q6UXH1 353 aaPredicted RBP12.11□□□□□ -0.47
SMG6-206ENST00000570668 EPM2AIP1Q7L775 607 aaPredicted RBP12.11□□□□□ -0.47
SMG6-206ENST00000570668 CEP57Q86XR8 500 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 C12orf76Q8N812 135 aaPredicted RBP12.11□□□□□ -0.47
SMG6-206ENST00000570668 GLIS3Q8NEA6 775 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 HDAC7Q8WUI4 952 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 HPS3Q969F9 1004 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 PAGE5Q96GU1 130 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 CLSTN3Q9BQT9 956 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 APOL5Q9BWW9 433 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 PHF7Q9BWX1 381 aaPredicted RBP12.11□□□□□ -0.47
SMG6-206ENST00000570668 BLZF1Q9H2G9 400 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 SFXN1Q9H9B4 322 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 DPP7Q9UHL4 492 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 DERAQ9Y315 318 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 NUB1Q9Y5A7 615 aa12.11□□□□□ -0.47
SMG6-206ENST00000570668 I3L4J1 428 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 SYN3O14994 580 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 TGM5O43548 720 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 PAPLNO95428 1278 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 LDHAP00338 332 aaKnown RBP12.1□□□□□ -0.47
SMG6-206ENST00000570668 MYL1P05976 194 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 RPL17P18621 184 aaKnown RBP12.1□□□□□ -0.47
SMG6-206ENST00000570668 TKTP29401 623 aaKnown RBP12.1□□□□□ -0.47
SMG6-206ENST00000570668 SSTR3P32745 418 aaPredicted RBP12.1□□□□□ -0.47
SMG6-206ENST00000570668 HOXD13P35453 343 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 SYKP43405 635 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 NDUFA8P51970 172 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 RARS2Q5T160 578 aaKnown RBP12.1□□□□□ -0.47
SMG6-206ENST00000570668 SPATA1Q5VX52 437 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 JADE1Q6IE81 842 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 ELMSAN1Q6PJG2 1045 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 ANKS3Q6ZW76 656 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 PALB2Q86YC2 1186 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 GRAMD1CQ8IYS0 662 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 CMASQ8NFW8 434 aaPredicted RBP12.1□□□□□ -0.47
SMG6-206ENST00000570668 ZNF507Q8TCN5 953 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 FAM212AQ96EL1 285 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 SUSD3Q96L08 255 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 NECTIN4Q96NY8 510 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 CBWD1Q9BRT8 395 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 PLEKHA4Q9H4M7 779 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 GDPD2Q9HCC8 539 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 MAN1C1Q9NR34 630 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 MTRRQ9UBK8 725 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 C2CD2Q9Y426 696 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 BACE2Q9Y5Z0 518 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 ANK1P16157 1881 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 PLXNA3P51805 1871 aa12.1□□□□□ -0.47
SMG6-206ENST00000570668 MTCL1Q9Y4B5 1905 aaKnown RBP12.09□□□□□ -0.47
SMG6-206ENST00000570668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.09□□□□□ -0.47
SMG6-206ENST00000570668 LOC730098B7Z3J9 87 aa12.09□□□□□ -0.47
SMG6-206ENST00000570668 KIAA0391O15091 583 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms