RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 MAN1C1Q9NR34 630 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 FAM13BQ9NYF5 915 aa14.2□□□□□ -0.14
CNOT1-220ENST00000569916 LACTBL1A8MY62 500 aa14.19□□□□□ -0.14
CNOT1-220ENST00000569916 I3L4J1 428 aa14.19□□□□□ -0.14
CNOT1-220ENST00000569916 WEE2P0C1S8 567 aa14.19□□□□□ -0.14
CNOT1-220ENST00000569916 TKTP29401 623 aaKnown RBP14.19□□□□□ -0.14
CNOT1-220ENST00000569916 ADSSP30520 456 aa14.19□□□□□ -0.14
CNOT1-220ENST00000569916 ALCAMQ13740 583 aa14.19□□□□□ -0.14
CNOT1-220ENST00000569916 ZBTB6Q15916 424 aa14.19□□□□□ -0.14
CNOT1-220ENST00000569916 ADALQ6DHV7 355 aa14.19□□□□□ -0.14
CNOT1-220ENST00000569916 SLFN12LQ6IEE8 588 aa14.19□□□□□ -0.14
CNOT1-220ENST00000569916 CNNM4Q6P4Q7 775 aa14.19□□□□□ -0.14
CNOT1-220ENST00000569916 KIF12Q96FN5 646 aa14.19□□□□□ -0.14
CNOT1-220ENST00000569916 NECTIN4Q96NY8 510 aa14.19□□□□□ -0.14
CNOT1-220ENST00000569916 ACCSQ96QU6 501 aa14.19□□□□□ -0.14
CNOT1-220ENST00000569916 CLSTN3Q9BQT9 956 aa14.19□□□□□ -0.14
CNOT1-220ENST00000569916 POMKQ9H5K3 350 aa14.19□□□□□ -0.14
CNOT1-220ENST00000569916 RPF1Q9H9Y2 349 aaKnown RBP14.19□□□□□ -0.14
CNOT1-220ENST00000569916 TGM5O43548 720 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 TRAPPC3O43617 180 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 C1RP00736 705 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 LRPAP1P30533 357 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 RPL9P32969 192 aaKnown RBP14.18□□□□□ -0.14
CNOT1-220ENST00000569916 MTHFRP42898 656 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 ACOT2P49753 483 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 ASIC1P78348 528 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 AMPD3Q01432 767 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 PDXDC1Q6P996 788 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 LILRA6Q6PI73 481 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 TMC5Q6UXY8 1006 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 GPR149Q86SP6 731 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 PALB2Q86YC2 1186 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 GLIS3Q8NEA6 775 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 HPS3Q969F9 1004 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 RPGRIP1Q96KN7 1286 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 SPATA32Q96LK8 384 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 RIPOR3Q96MK2 946 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 C7orf25Q9BPX7 421 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 EPHX3Q9H6B9 360 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 MTRRQ9UBK8 725 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 AGO2Q9UKV8 859 aaKnown RBP14.18□□□□□ -0.14
CNOT1-220ENST00000569916 KCNH3Q9ULD8 1083 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 UBQLN1Q9UMX0 589 aaKnown RBP14.18□□□□□ -0.14
CNOT1-220ENST00000569916 EXOC7Q9UPT5 735 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 PCDHB13Q9Y5F0 798 aa14.18□□□□□ -0.14
CNOT1-220ENST00000569916 SPDYE4A6NLX3 237 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 PI4K2BG5E9Z4 385 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 ADAM12O43184 909 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 SPATA31D3P0C874 917 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 CYP3A5P20815 502 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 CASP1P29466 404 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 GUCY2FP51841 1108 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 EHHADHQ08426 723 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 JADE1Q6IE81 842 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 CRELD2Q6UXH1 353 aaPredicted RBP14.17□□□□□ -0.14
CNOT1-220ENST00000569916 SPATA31D4Q6ZUB0 917 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 RNF135Q8IUD6 432 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 CD302Q8IX05 232 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 CMASQ8NFW8 434 aaPredicted RBP14.17□□□□□ -0.14
CNOT1-220ENST00000569916 HDAC7Q8WUI4 952 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 POMGNT1Q8WZA1 660 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 TSPAN18Q96SJ8 248 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 PYM1Q9BRP8 204 aaKnown RBP14.17□□□□□ -0.14
CNOT1-220ENST00000569916 DPP7Q9UHL4 492 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 ATP6V1DQ9Y5K8 247 aa14.17□□□□□ -0.14
CNOT1-220ENST00000569916 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.17□□□□□ -0.14
CNOT1-220ENST00000569916 XPOTO43592 962 aaKnown RBP14.16□□□□□ -0.14
CNOT1-220ENST00000569916 ACTN4O43707 911 aaKnown RBP14.16□□□□□ -0.14
CNOT1-220ENST00000569916 RFPL2O75678 378 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 PRPF6O94906 941 aaKnown RBP14.16□□□□□ -0.14
CNOT1-220ENST00000569916 PAPLNO95428 1278 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 NFICP08651 508 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 PFKFB1P16118 471 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 SP100P23497 879 aaPredicted RBP14.16□□□□□ -0.14
CNOT1-220ENST00000569916 MCM4P33991 863 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 POSTNQ15063 836 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 FAM26FQ5R3K3 315 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 ATAT1Q5SQI0 421 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 SPATA1Q5VX52 437 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 ELMSAN1Q6PJG2 1045 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 RSPO2Q6UXX9 243 aaPredicted RBP14.16□□□□□ -0.14
CNOT1-220ENST00000569916 C15orf39Q6ZRI6 1047 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 UNC13DQ70J99 1090 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 KREMEN2Q8NCW0 462 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 FAM212AQ96EL1 285 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 SUSD3Q96L08 255 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 BLZF1Q9H2G9 400 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 PLEKHA4Q9H4M7 779 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 ASB7Q9H672 318 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 SERTAD1Q9UHV2 236 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 FBXW11Q9UKB1 542 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 HPSEQ9Y251 543 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 NUB1Q9Y5A7 615 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 BACE2Q9Y5Z0 518 aa14.16□□□□□ -0.14
CNOT1-220ENST00000569916 SCN1AP35498 2009 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 A0A1B0GVL5 298 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 PPEF2O14830 753 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 SYN3O14994 580 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 EIF3DO15371 548 aaKnown RBP eCLIP14.15□□□□□ -0.14
CNOT1-220ENST00000569916 DCXO43602 365 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms