RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 NIF3L1Q9GZT8 377 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 MIS12Q9H081 205 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 FER1L6Q2WGJ9 1857 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 ATG7O95352 703 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 ARL1P40616 181 aaPredicted RBP12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 MYL6P60660 151 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 GPC5P78333 572 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 UAP1Q16222 522 aaPredicted RBP12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 EEF1DP3Q658K8 133 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 WDR49Q8IV35 697 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 BRSK2Q8IWQ3 736 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 SLC30A5Q8TAD4 765 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 MAK16Q9BXY0 300 aaKnown RBP12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 ST6GALNAC4Q9H4F1 302 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 DPP3Q9NY33 737 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 ARHGAP20Q9P2F6 1191 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 GABRQQ9UN88 632 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 SEPT4O43236 478 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 TREHO43280 583 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 HOXC6P09630 235 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 AKAP5P24588 427 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 OR6B2Q6IFH4 312 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 SLC27A1Q6PCB7 646 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 FAM149B1Q96BN6 582 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 ZNF560Q96MR9 790 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 WDR24Q96S15 920 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 PCYT2Q99447 389 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 TMEM106CQ9BVX2 250 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 MRPL47Q9HD33 250 aaKnown RBP12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 DAAM1Q9Y4D1 1078 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 A0A087X0T9 212 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 FAM228BP0C875 321 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 ATP4AP20648 1035 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 GRK4P32298 578 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 TNFSF9P41273 254 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 MKRN4PQ13434 485 aaPredicted RBP12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 CUL2Q13617 745 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 LONRF2Q1L5Z9 754 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 C8orf74Q6P047 294 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 RHOT2Q8IXI1 618 aa12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 DHX38Q92620 1227 aaKnown RBP12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 NTPCRQ9BSD7 190 aaKnown RBP12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.97□□□□□ -0.33
TMEM170A-205ENST00000568559 MSCO60682 206 aa12.96□□□□□ -0.33
TMEM170A-205ENST00000568559 LGR5O75473 907 aa12.96□□□□□ -0.33
TMEM170A-205ENST00000568559 TUBB4BP68371 445 aa12.96□□□□□ -0.33
TMEM170A-205ENST00000568559 FAM117BQ6P1L5 589 aa12.96□□□□□ -0.33
TMEM170A-205ENST00000568559 CEP120Q8N960 986 aa12.96□□□□□ -0.33
TMEM170A-205ENST00000568559 RNF19AQ9NV58 838 aa12.96□□□□□ -0.33
TMEM170A-205ENST00000568559 TNFSF13BQ9Y275 285 aa12.96□□□□□ -0.33
TMEM170A-205ENST00000568559 F8VZ95 297 aa12.96□□□□□ -0.33
TMEM170A-205ENST00000568559 CAPN9O14815 690 aa12.96□□□□□ -0.33
TMEM170A-205ENST00000568559 ZNF200P98182 395 aaPredicted RBP12.96□□□□□ -0.33
TMEM170A-205ENST00000568559 B3GNT9Q6UX72 402 aa12.96□□□□□ -0.33
TMEM170A-205ENST00000568559 ARHGEF19Q8IW93 802 aa12.96□□□□□ -0.33
TMEM170A-205ENST00000568559 PGBD4Q96DM1 585 aa12.96□□□□□ -0.33
TMEM170A-205ENST00000568559 ZIC5Q96T25 663 aa12.96□□□□□ -0.33
TMEM170A-205ENST00000568559 CDT1Q9H211 546 aa12.96□□□□□ -0.33
TMEM170A-205ENST00000568559 PCDHB2Q9Y5E7 798 aa12.96□□□□□ -0.33
TMEM170A-205ENST00000568559 POLR2AP24928 1970 aaKnown RBP12.96□□□□□ -0.34
TMEM170A-205ENST00000568559 GPR25O00155 361 aa12.96□□□□□ -0.34
TMEM170A-205ENST00000568559 RNF8O76064 485 aa12.96□□□□□ -0.34
TMEM170A-205ENST00000568559 ASGR1P07306 291 aa12.96□□□□□ -0.34
TMEM170A-205ENST00000568559 GALCP54803 685 aa12.96□□□□□ -0.34
TMEM170A-205ENST00000568559 ERCC6LQ2NKX8 1250 aa12.96□□□□□ -0.34
TMEM170A-205ENST00000568559 KAZNQ674X7 775 aa12.96□□□□□ -0.34
TMEM170A-205ENST00000568559 NACA2Q9H009 215 aa12.96□□□□□ -0.34
TMEM170A-205ENST00000568559 HES2Q9Y543 173 aa12.96□□□□□ -0.34
TMEM170A-205ENST00000568559 COL1A2P08123 1366 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 LACTBL1A8MY62 500 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 M0QYV0 167 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 CD4P01730 458 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 KCNA10Q16322 511 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 PPP1R2P3Q6NXS1 205 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 URGCPQ8TCY9 931 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 CPA5Q8WXQ8 436 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 RASAL2Q9UJF2 1139 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 SGPL1O95470 568 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 C22orf31O95567 290 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 MARSP56192 900 aaKnown RBP12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 SMAD1Q15797 465 aaKnown RBP12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 MAMDC4Q6UXC1 1216 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 C12orf56Q8IXR9 622 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 ARFGAP3Q9NP61 516 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 SRRDQ9UH36 339 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 ANAPC7Q9UJX3 599 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 UBQLN1Q9UMX0 589 aaKnown RBP12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 CDY2AQ9Y6F7 541 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 KNL1Q8NG31 2342 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 RNF225M0QZC1 329 aaPredicted RBP12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 PDGFRBP09619 1106 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 ARF4P18085 180 aaPredicted RBP12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 LEKR1Q6ZMV7 388 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 TRPV2Q9Y5S1 764 aa12.95□□□□□ -0.34
TMEM170A-205ENST00000568559 PQBP1O60828 265 aaKnown RBP12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 SRGAP2O75044 1071 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 PBX1P40424 430 aa12.94□□□□□ -0.34
TMEM170A-205ENST00000568559 PPP1R7Q15435 360 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms