RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 GNPTABQ3T906 1256 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 FILIP1LQ4L180 1135 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 ARSHQ5FYA8 562 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 HERC4Q5GLZ8 1057 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-218ENST00000568153 OVOS1Q6IE37 1185 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 B3GNT9Q6UX72 402 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 CCDC81Q6ZN84 652 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 GPBP1Q86WP2 473 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 ANKRD20A12PQ8NF67 263 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 GPRC5AQ8NFJ5 357 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 IL31RAQ8NI17 732 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 NEK9Q8TD19 979 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 NOC3LQ8WTT2 800 aaKnown RBP6.79□□□□□ -1.32
CAPN3-218ENST00000568153 DNAJC19Q96DA6 116 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 HEXIM2Q96MH2 286 aaKnown RBP6.79□□□□□ -1.32
CAPN3-218ENST00000568153 FERD3LQ96RJ6 166 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 MED15Q96RN5 788 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 CTAGE1Q96RT6 745 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 MPHOSPH6Q99547 160 aaKnown RBP6.79□□□□□ -1.32
CAPN3-218ENST00000568153 SENP7Q9BQF6 1050 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 MOV10L1Q9BXT6 1211 aaKnown RBP6.79□□□□□ -1.32
CAPN3-218ENST00000568153 HSD3B7Q9H2F3 369 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 MROH8Q9H579 483 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 ZSWIM4Q9H7M6 989 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 SLC39A2Q9NP94 309 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 IMPACTQ9P2X3 320 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 ADD3Q9UEY8 706 aaKnown RBP6.79□□□□□ -1.32
CAPN3-218ENST00000568153 TCEAL9Q9UHQ7 104 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 MAPK8IP1Q9UQF2 711 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 MYH4Q9Y623 1939 aa6.79□□□□□ -1.32
CAPN3-218ENST00000568153 MYH6P13533 1939 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 CCL15-CCL14A0A0B4J2E2 113 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 DDX39AO00148 427 aaKnown RBP6.78□□□□□ -1.32
CAPN3-218ENST00000568153 PDHXO00330 501 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 CYP26A1O43174 497 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 DKC1O60832 514 aaKnown RBP eCLIP6.78□□□□□ -1.32
CAPN3-218ENST00000568153 ATP9AO75110 1047 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 PRNPP04156 253 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 FCER1AP12319 257 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 ATP1A3P13637 1013 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 ZNF18P17022 549 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 CCNE1P24864 410 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 SFNP31947 248 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 QARSP47897 775 aaKnown RBP6.78□□□□□ -1.32
CAPN3-218ENST00000568153 GCLCP48506 637 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-218ENST00000568153 JAK3P52333 1124 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 CCNA1P78396 465 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 CNTN2Q02246 1040 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 CYP4A11Q02928 519 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 SPAG1Q07617 926 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 ITGB3BPQ13352 177 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-218ENST00000568153 GIT2Q14161 759 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 KCTD2Q14681 263 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 NR1I3Q14994 352 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 CCL15Q16663 113 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 CST9Q5W186 159 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 ZNF746Q6NUN9 644 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-218ENST00000568153 RINT1Q6NUQ1 792 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 CCDC186Q7Z3E2 898 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 ANKRD23Q86SG2 305 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 CDH24Q86UP0 819 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 ZSCAN30Q86W11 494 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 CREBRFQ8IUR6 639 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 GUF1Q8N442 669 aaKnown RBP6.78□□□□□ -1.32
CAPN3-218ENST00000568153 SHCBP1Q8NEM2 672 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 RDM1Q8NG50 284 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 PIGOQ8TEQ8 1089 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 PPP1R13LQ8WUF5 828 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 CYB5D2Q8WUJ1 264 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 P2RX5Q93086 422 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 NAP1L5Q96NT1 182 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-218ENST00000568153 INPP4AQ96PE3 977 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-218ENST00000568153 MMP19Q99542 508 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 SRRTQ9BXP5 876 aaKnown RBP6.78□□□□□ -1.32
CAPN3-218ENST00000568153 XPO4Q9C0E2 1151 aaKnown RBP6.78□□□□□ -1.32
CAPN3-218ENST00000568153 BHMT2Q9H2M3 363 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 THAP9Q9H5L6 903 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 LRRC4CQ9HCJ2 640 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 SAMSN1Q9NSI8 373 aaKnown RBP6.78□□□□□ -1.32
CAPN3-218ENST00000568153 KCND2Q9NZV8 630 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 MAGEC2Q9UBF1 373 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-218ENST00000568153 CTNND2Q9UQB3 1225 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 GDAQ9Y2T3 454 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 PCDHA10Q9Y5I2 948 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 SBF1O95248 1867 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 MYH8P13535 1937 aa6.78□□□□□ -1.32
CAPN3-218ENST00000568153 DICER1Q9UPY3 1922 aaKnown RBP6.78□□□□□ -1.32
CAPN3-218ENST00000568153 NPHP3-ACAD11A0A0J9YXS1 232 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 ARHGEF35A5YM69 484 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 MEIS3P2A8K0S8 358 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 BTBD19C9JJ37 291 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 STRNO43815 780 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 PEX10O60683 326 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 LYPLA2O95372 231 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 TPM2P07951 284 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 ZBTB48P10074 688 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-218ENST00000568153 TGFB3P10600 412 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 CYP2C8P10632 490 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 GAP43P17677 238 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 ATF4P18848 351 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms