RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 SOWAHDA6NJG2 315 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 RECQL4O94761 1208 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 VNN1O95497 513 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 CD4P01730 458 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 TNNC2P02585 160 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 BFSP2Q13515 415 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 ARHGAP44Q17R89 818 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 TRIM60Q495X7 471 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 SCARA3Q6AZY7 606 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 LRRC8DQ7L1W4 858 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 TMEM130Q8N3G9 435 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 PPM1KQ8N3J5 372 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 KIF12Q96FN5 646 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 EDEM3Q9BZQ6 932 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 CXCL16Q9H2A7 254 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 ASB7Q9H672 318 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 RNF19AQ9NV58 838 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 KLK14Q9P0G3 267 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 IPPQ9Y573 584 aa11.26□□□□□ -0.61
TCF4-236ENST00000567880 MGEA5O60502 916 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 KRT19P08727 400 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 PNMA6AP0CW24 399 aaPredicted RBP11.25□□□□□ -0.61
TCF4-236ENST00000567880 FECHP22830 423 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 AP3M2P53677 418 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 NCOA4Q13772 614 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 MBTPS1Q14703 1052 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 TMEM132DQ14C87 1099 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 WDR44Q5JSH3 913 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 GLRA4Q5JXX5 417 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 SFMBT2Q5VUG0 894 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 WDR59Q6PJI9 974 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 TRAF7Q6Q0C0 670 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 TRAPPC11Q7Z392 1133 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 C17orf53Q8N3J3 647 aaPredicted RBP11.25□□□□□ -0.61
TCF4-236ENST00000567880 SMG8Q8ND04 991 aaKnown RBP11.25□□□□□ -0.61
TCF4-236ENST00000567880 PAWRQ96IZ0 340 aaKnown RBP11.25□□□□□ -0.61
TCF4-236ENST00000567880 NT5C1BQ96P26 610 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 CHP1Q99653 195 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 TMEM106CQ9BVX2 250 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 NAA15Q9BXJ9 866 aaKnown RBP11.25□□□□□ -0.61
TCF4-236ENST00000567880 RNF39Q9H2S5 420 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 CHST12Q9NRB3 414 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 C1orf112Q9NSG2 853 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 FAM105AQ9NUU6 356 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 PLAGL2Q9UPG8 496 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 PCDHB2Q9Y5E7 798 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 DCDC2CA8MYV0 355 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 CST3P01034 146 aaPredicted RBP11.25□□□□□ -0.61
TCF4-236ENST00000567880 SELPP16109 830 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 TLE2Q04725 743 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 TRPC3Q13507 836 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 MTF1Q14872 753 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 DRAP1Q14919 205 aaPredicted RBP11.25□□□□□ -0.61
TCF4-236ENST00000567880 SPOPLQ6IQ16 392 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 CYP26C1Q6V0L0 522 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 USP38Q8NB14 1042 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 KAT5Q92993 513 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 TATDN2Q93075 761 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 SNX27Q96L92 541 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 IFIH1Q9BYX4 1025 aaKnown RBP11.25□□□□□ -0.61
TCF4-236ENST00000567880 FBXL5Q9UKA1 691 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 PRDM4Q9UKN5 801 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 ATP11BQ9Y2G3 1177 aa11.25□□□□□ -0.61
TCF4-236ENST00000567880 UMODL1Q5DID0 1318 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 ARHGAP6O43182 974 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 ZNF500O60304 480 aaPredicted RBP11.24□□□□□ -0.61
TCF4-236ENST00000567880 ITGB3P05106 788 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 PLEKP08567 350 aaPredicted RBP11.24□□□□□ -0.61
TCF4-236ENST00000567880 COL6A1P12109 1028 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 GUCY2FP51841 1108 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 MYL6P60660 151 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 POU5F1Q01860 360 aaKnown RBP11.24□□□□□ -0.61
TCF4-236ENST00000567880 ASIC2Q16515 512 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 TDRD12Q587J7 1177 aaKnown RBP11.24□□□□□ -0.61
TCF4-236ENST00000567880 ANKRD33Q7Z3H0 272 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 TMTC1Q8IUR5 882 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 CD302Q8IX05 232 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 ANKLE1Q8NAG6 615 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 RNF169Q8NCN4 708 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 ADAM2Q99965 735 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 PPP1R12CQ9BZL4 782 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 IMPG2Q9BZV3 1241 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 MCOLN1Q9GZU1 580 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 NUCKS1Q9H1E3 243 aaKnown RBP11.24□□□□□ -0.61
TCF4-236ENST00000567880 C11orf49Q9H6J7 331 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 PLEKHA5Q9HAU0 1116 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 SQORQ9Y6N5 450 aa11.24□□□□□ -0.61
TCF4-236ENST00000567880 MEIS3P2A8K0S8 358 aa11.23□□□□□ -0.61
TCF4-236ENST00000567880 F8VZ95 297 aa11.23□□□□□ -0.61
TCF4-236ENST00000567880 GFPT2O94808 682 aa11.23□□□□□ -0.61
TCF4-236ENST00000567880 ITGA4P13612 1032 aa11.23□□□□□ -0.61
TCF4-236ENST00000567880 ZNF16P17020 682 aaPredicted RBP11.23□□□□□ -0.61
TCF4-236ENST00000567880 USP8P40818 1118 aa11.23□□□□□ -0.61
TCF4-236ENST00000567880 MFAP3P55082 362 aa11.23□□□□□ -0.61
TCF4-236ENST00000567880 JAM2P57087 298 aa11.23□□□□□ -0.61
TCF4-236ENST00000567880 NOP14P78316 857 aaKnown RBP11.23□□□□□ -0.61
TCF4-236ENST00000567880 FAAP100Q0VG06 881 aa11.23□□□□□ -0.61
TCF4-236ENST00000567880 MEA1Q16626 185 aa11.23□□□□□ -0.61
TCF4-236ENST00000567880 RAD9BQ6WBX8 426 aa11.23□□□□□ -0.61
TCF4-236ENST00000567880 C1orf127Q8N9H9 656 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms