RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 COLEC11Q9BWP8 271 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 BRIP1Q9BX63 1249 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 LMAN2LQ9H0V9 348 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 WNT8AQ9H1J5 351 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 DHX36Q9H2U1 1008 aaKnown RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 CARS2Q9HA77 564 aaKnown RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 SARS2Q9NP81 518 aaKnown RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 SLC6A20Q9NP91 592 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 TDP1Q9NUW8 608 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 PNPOQ9NVS9 261 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 HAUS2Q9NVX0 235 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 NKIRAS2Q9NYR9 191 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 NFKBIL1Q9UBC1 381 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 MYO1AQ9UBC5 1043 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 AFF4Q9UHB7 1163 aaKnown RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 PRSS50Q9UI38 385 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 FEM1BQ9UK73 627 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 TMPRSS11EQ9UL52 423 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 SYNPO2Q9UMS6 1093 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 TELO2Q9Y4R8 837 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 PCDHA1Q9Y5I3 950 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 CAPN6Q9Y6Q1 641 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 U3KQE9 123 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 A0A0B4J269 797 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 PABPN1LA6NDY0 278 aaKnown RBP3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 PGPEP1LA6NFU8 196 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 ISM1B1AKI9 464 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 MYO1FO00160 1098 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 SLC16A6O15403 523 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 DAPK3O43293 454 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 ASNA1O43681 348 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 TADA3O75528 432 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 RTN3O95197 1032 aaPredicted RBP3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 STARD3NLO95772 234 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 PFKMP08237 780 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 TGFB3P10600 412 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 TYRP14679 529 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 TACR1P25103 407 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 AOAHP28039 575 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 SDHAP31040 664 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 GJA4P35212 333 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 ACTN2P35609 894 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 PAPOLAP51003 745 aaKnown RBP3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 NKX6-1P78426 367 aaPredicted RBP3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 PSMD6Q15008 389 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 KHDC1Q4VXA5 237 aaKnown RBP3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 ARHGAP15Q53QZ3 475 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 STEAP3Q658P3 488 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 KLHL17Q6TDP4 642 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 GADL1Q6ZQY3 521 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 NEK10Q6ZWH5 1172 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 RSPH3Q86UC2 560 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 CHD1LQ86WJ1 897 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 LYSMD2Q8IV50 215 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 SPACA3Q8IXA5 215 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 TEX11Q8IYF3 940 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 PCSK9Q8NBP7 692 aaKnown RBP3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 LINC00116Q8NCU8 138 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 FAM71BQ8TC56 605 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 BRIX1Q8TDN6 353 aaKnown RBP3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 ADAMTS18Q8TE60 1221 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 ATRIPQ8WXE1 791 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 TMX3Q96JJ7 454 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 MAML3Q96JK9 1138 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 ZC3H10Q96K80 434 aaKnown RBP3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 GPR62Q9BZJ7 368 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 GREM2Q9H772 168 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 MLXIPQ9HAP2 919 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 KCND1Q9NSA2 647 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 TBC1D23Q9NUY8 699 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 COL20A1Q9P218 1284 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 IGSF9Q9P2J2 1179 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 TBC1D29Q9UFV1 150 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 SCAF8Q9UPN6 1271 aaKnown RBP3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 NUB1Q9Y5A7 615 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 NUMBLQ9Y6R0 609 aa3.79□□□□□ -1.8
HERPUD1-211ENST00000566550 MYPNQ86TC9 1320 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 PITPNM2Q9BZ72 1349 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 SMTNL1A8MU46 457 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 H3BS24 57 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 FCHO1O14526 889 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 THAP12O43422 761 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 DOK2O60496 412 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 PRLP01236 227 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 HSP90AB1P08238 724 aaKnown RBP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 HNRNPA1P09651 372 aaKnown RBP eCLIP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 SRFP11831 508 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 MYCLP12524 364 aaPredicted RBP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 GYS1P13807 737 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 HNRNPLP14866 589 aaKnown RBP eCLIP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 MC4RP32245 332 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 CTNNA1P35221 906 aaKnown RBP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 UBA7P41226 1012 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 STAT1P42224 750 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 KCNJ5P48544 419 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 PRKAA2P54646 552 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 CASP6P55212 293 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 PFKPQ01813 784 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 ROR1Q01973 937 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms