RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 BRCC3P46736 316 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 ATP2C1P98194 919 aaPredicted RBP13.06□□□□□ -0.32
UBR1-206ENST00000566493 RAD51AP2Q09MP3 1159 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 PABPC1LQ4VXU2 614 aaKnown RBP13.06□□□□□ -0.32
UBR1-206ENST00000566493 PARM1Q6UWI2 310 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 TAS1R3Q7RTX0 852 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 KCNK18Q7Z418 384 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 FRMD5Q7Z6J6 570 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 SYT2Q8N9I0 419 aaPredicted RBP13.06□□□□□ -0.32
UBR1-206ENST00000566493 ST13P5Q8NFI4 369 aaPredicted RBP13.06□□□□□ -0.32
UBR1-206ENST00000566493 SPIRE2Q8WWL2 714 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 FGF13Q92913 245 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 NKD2Q969F2 451 aaPredicted RBP13.06□□□□□ -0.32
UBR1-206ENST00000566493 SHDQ96IW2 340 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 SNX27Q96L92 541 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 NTPCRQ9BSD7 190 aaKnown RBP13.06□□□□□ -0.32
UBR1-206ENST00000566493 MMTAG2Q9BU76 263 aaKnown RBP13.06□□□□□ -0.32
UBR1-206ENST00000566493 OCEL1Q9H607 264 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 TBC1D17Q9HA65 648 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 UPF2Q9HAU5 1272 aaKnown RBP13.06□□□□□ -0.32
UBR1-206ENST00000566493 KCNH3Q9ULD8 1083 aa13.06□□□□□ -0.32
UBR1-206ENST00000566493 DOCK6Q96HP0 2047 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 USP34Q70CQ2 3546 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 VWA3AA6NCI4 1184 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 H0YCG3 227 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 PRRG1O14668 218 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 SYN3O14994 580 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 TOM1L1O75674 476 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 LRG1P02750 347 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 PLS3P13797 630 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 PROZP22891 400 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 GJB2P29033 226 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 ARPP19P56211 112 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 SOX4Q06945 474 aaPredicted RBP13.05□□□□□ -0.32
UBR1-206ENST00000566493 MAPK7Q13164 816 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 NOLC1Q14978 699 aaKnown RBP eCLIP13.05□□□□□ -0.32
UBR1-206ENST00000566493 SPECC1Q5M775 1068 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 VARS2Q5ST30 1063 aaKnown RBP13.05□□□□□ -0.32
UBR1-206ENST00000566493 HYIQ5T013 277 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 PHLDB3Q6NSJ2 640 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 CD300LGQ6UXG3 332 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 RSPO2Q6UXX9 243 aaPredicted RBP13.05□□□□□ -0.32
UBR1-206ENST00000566493 ASCL5Q7RTU5 278 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 C3orf58Q8NDZ4 430 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 ZNF461Q8TAF7 563 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 ITFG1Q8TB96 612 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 FGF14Q92915 247 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 ZMAT2Q96NC0 199 aaKnown RBP13.05□□□□□ -0.32
UBR1-206ENST00000566493 PLIN2Q99541 437 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 HCFC1R1Q9NWW0 138 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 KCND2Q9NZV8 630 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 CNTN3Q9P232 1028 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 ANKFY1Q9P2R3 1169 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 MRPS23Q9Y3D9 190 aaKnown RBP13.05□□□□□ -0.32
UBR1-206ENST00000566493 SIT1Q9Y3P8 196 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 MYH15Q9Y2K3 1946 aa13.05□□□□□ -0.32
UBR1-206ENST00000566493 PRR23AA6NEV1 266 aa13.04□□□□□ -0.32
UBR1-206ENST00000566493 CLDN3O15551 220 aa13.04□□□□□ -0.32
UBR1-206ENST00000566493 PLA2G4BP0C869 781 aa13.04□□□□□ -0.32
UBR1-206ENST00000566493 PTPN2P17706 415 aa13.04□□□□□ -0.32
UBR1-206ENST00000566493 MCM4P33991 863 aa13.04□□□□□ -0.32
UBR1-206ENST00000566493 MCM2P49736 904 aa13.04□□□□□ -0.32
UBR1-206ENST00000566493 GPC5P78333 572 aa13.04□□□□□ -0.32
UBR1-206ENST00000566493 ROR1Q01973 937 aa13.04□□□□□ -0.32
UBR1-206ENST00000566493 ARL6IP4Q66PJ3 421 aaKnown RBP13.04□□□□□ -0.32
UBR1-206ENST00000566493 SLC8B1Q6J4K2 584 aa13.04□□□□□ -0.32
UBR1-206ENST00000566493 ZPBP2Q6X784 338 aa13.04□□□□□ -0.32
UBR1-206ENST00000566493 C18orf25Q96B23 403 aaPredicted RBP13.04□□□□□ -0.32
UBR1-206ENST00000566493 BICD1Q96G01 975 aa13.04□□□□□ -0.32
UBR1-206ENST00000566493 TMX3Q96JJ7 454 aa13.04□□□□□ -0.32
UBR1-206ENST00000566493 ZBTB45Q96K62 511 aaPredicted RBP13.04□□□□□ -0.32
UBR1-206ENST00000566493 PNMA5Q96PV4 448 aa13.04□□□□□ -0.32
UBR1-206ENST00000566493 RPP25Q9BUL9 199 aaKnown RBP13.04□□□□□ -0.32
UBR1-206ENST00000566493 LARSQ9P2J5 1176 aaKnown RBP13.04□□□□□ -0.32
UBR1-206ENST00000566493 DNMT3BQ9UBC3 853 aaKnown RBP13.04□□□□□ -0.32
UBR1-206ENST00000566493 SMC3Q9UQE7 1217 aa13.04□□□□□ -0.32
UBR1-206ENST00000566493 ABLIM1O14639 778 aa13.03□□□□□ -0.32
UBR1-206ENST00000566493 SLC26A4O43511 780 aa13.03□□□□□ -0.32
UBR1-206ENST00000566493 DCNP07585 359 aaKnown RBP13.03□□□□□ -0.32
UBR1-206ENST00000566493 MAPTP10636 758 aaKnown RBP13.03□□□□□ -0.32
UBR1-206ENST00000566493 MARCKSP29966 332 aaPredicted RBP13.03□□□□□ -0.32
UBR1-206ENST00000566493 UBA7P41226 1012 aa13.03□□□□□ -0.32
UBR1-206ENST00000566493 SLC12A3P55017 1021 aa13.03□□□□□ -0.32
UBR1-206ENST00000566493 PFKPQ01813 784 aa13.03□□□□□ -0.32
UBR1-206ENST00000566493 CTXN3Q4LDR2 81 aa13.03□□□□□ -0.32
UBR1-206ENST00000566493 SEZ6Q53EL9 994 aa13.03□□□□□ -0.32
UBR1-206ENST00000566493 NPAS3Q8IXF0 933 aa13.03□□□□□ -0.32
UBR1-206ENST00000566493 ELMOD1Q8N336 334 aa13.03□□□□□ -0.32
UBR1-206ENST00000566493 TMEM161BQ8NDZ6 487 aa13.03□□□□□ -0.32
UBR1-206ENST00000566493 APPL2Q8NEU8 664 aa13.03□□□□□ -0.32
UBR1-206ENST00000566493 ING5Q8WYH8 240 aa13.03□□□□□ -0.32
UBR1-206ENST00000566493 CALML4Q96GE6 196 aa13.03□□□□□ -0.32
UBR1-206ENST00000566493 AK8Q96MA6 479 aa13.03□□□□□ -0.32
UBR1-206ENST00000566493 KXD1Q9BQD3 176 aa13.03□□□□□ -0.32
UBR1-206ENST00000566493 CYP4F11Q9HBI6 524 aa13.03□□□□□ -0.32
UBR1-206ENST00000566493 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.03□□□□□ -0.32
UBR1-206ENST00000566493 ARHGEF37A1IGU5 675 aa13.02□□□□□ -0.33
UBR1-206ENST00000566493 WDR27A2RRH5 827 aa13.02□□□□□ -0.33
UBR1-206ENST00000566493 ABLIM3O94929 683 aa13.02□□□□□ -0.33
UBR1-206ENST00000566493 RHOP08100 348 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms