RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 ROPN1Q9HAT0 212 aaPredicted RBP16.28■□□□□ 0.2
HERC2-207ENST00000564734 SEPT9Q9UHD8 586 aaPredicted RBP16.28■□□□□ 0.2
HERC2-207ENST00000564734 SPATA31C2B4DYI2 1134 aa16.27■□□□□ 0.2
HERC2-207ENST00000564734 HLA-DRAP01903 254 aa16.27■□□□□ 0.2
HERC2-207ENST00000564734 ITIH2P19823 946 aa16.27■□□□□ 0.2
HERC2-207ENST00000564734 DSG3P32926 999 aa16.27■□□□□ 0.2
HERC2-207ENST00000564734 SPRED3Q2MJR0 410 aa16.27■□□□□ 0.2
HERC2-207ENST00000564734 SNRNP48Q6IEG0 339 aaKnown RBP16.27■□□□□ 0.2
HERC2-207ENST00000564734 SYDE1Q6ZW31 735 aaPredicted RBP16.27■□□□□ 0.2
HERC2-207ENST00000564734 UHMK1Q8TAS1 419 aaKnown RBP16.27■□□□□ 0.2
HERC2-207ENST00000564734 TRIM11Q96F44 468 aa16.27■□□□□ 0.2
HERC2-207ENST00000564734 IFT74Q96LB3 600 aa16.27■□□□□ 0.2
HERC2-207ENST00000564734 DCLK3Q9C098 648 aa16.27■□□□□ 0.2
HERC2-207ENST00000564734 ZNF112Q9UJU3 913 aa16.27■□□□□ 0.2
HERC2-207ENST00000564734 NEU2Q9Y3R4 380 aa16.27■□□□□ 0.2
HERC2-207ENST00000564734 PTPRJQ12913 1337 aa16.27■□□□□ 0.2
HERC2-207ENST00000564734 H0YCG3 227 aa16.27■□□□□ 0.19
HERC2-207ENST00000564734 ABCD1P33897 745 aa16.27■□□□□ 0.19
HERC2-207ENST00000564734 PPP1R7Q15435 360 aa16.27■□□□□ 0.19
HERC2-207ENST00000564734 LACTB2Q53H82 288 aaPredicted RBP16.27■□□□□ 0.19
HERC2-207ENST00000564734 LMBRD2Q68DH5 695 aaPredicted RBP16.27■□□□□ 0.19
HERC2-207ENST00000564734 LLGL2Q6P1M3 1020 aa16.27■□□□□ 0.19
HERC2-207ENST00000564734 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.27■□□□□ 0.19
HERC2-207ENST00000564734 CACNA2D3Q8IZS8 1091 aa16.27■□□□□ 0.19
HERC2-207ENST00000564734 BICD1Q96G01 975 aa16.27■□□□□ 0.19
HERC2-207ENST00000564734 UMODL1Q5DID0 1318 aa16.27■□□□□ 0.19
HERC2-207ENST00000564734 RASGRF2O14827 1237 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 PIGRP01833 764 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 ATP4AP20648 1035 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 NLRP11P59045 1033 aaKnown RBP16.26■□□□□ 0.19
HERC2-207ENST00000564734 BPIFB4P59827 614 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 LLGL1Q15334 1064 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 NBPF12Q5TAG4 269 aaPredicted RBP16.26■□□□□ 0.19
HERC2-207ENST00000564734 C9orf131Q5VYM1 1079 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 CCDC13Q8IYE1 715 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 SCYL3Q8IZE3 742 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 MAIP1Q8WWC4 291 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 C12orf42Q96LP6 360 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 CDC42EP4Q9H3Q1 356 aaKnown RBP16.26■□□□□ 0.19
HERC2-207ENST00000564734 CYP39A1Q9NYL5 469 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 SMIM23A6NLE4 172 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 PROSCO94903 275 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 CFHP08603 1231 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 CALCOCO2Q13137 446 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 KLF1Q13351 362 aaPredicted RBP16.26■□□□□ 0.19
HERC2-207ENST00000564734 SNX1Q13596 522 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 TMEM132BQ14DG7 1078 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 XKR3Q5GH77 459 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 GKAP1Q5VSY0 366 aaPredicted RBP16.26■□□□□ 0.19
HERC2-207ENST00000564734 CCDC121Q6ZUS5 278 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 CPLX4Q7Z7G2 160 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 ATG4AQ8WYN0 398 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 CABS1Q96KC9 395 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 SELENOSQ9BQE4 189 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 JPH2Q9BR39 696 aaPredicted RBP16.26■□□□□ 0.19
HERC2-207ENST00000564734 APOBEC3GQ9HC16 384 aaKnown RBP16.26■□□□□ 0.19
HERC2-207ENST00000564734 DOCK1Q14185 1865 aa16.26■□□□□ 0.19
HERC2-207ENST00000564734 DNM1LO00429 736 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 ATP2A1O14983 1001 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 CHKAP35790 457 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 LIG4P49917 911 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 SPOPLQ6IQ16 392 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 DDX23Q9BUQ8 820 aaKnown RBP16.25■□□□□ 0.19
HERC2-207ENST00000564734 ACTR5Q9H9F9 607 aaPredicted RBP16.25■□□□□ 0.19
HERC2-207ENST00000564734 CNTN6Q9UQ52 1028 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 ZNF541Q9H0D2 1346 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 COL11A1P12107 1806 aaPredicted RBP16.25■□□□□ 0.19
HERC2-207ENST00000564734 SUPT20HL2P0C7V6 817 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 PTPRAP18433 802 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 SUPT20HL1Q3ZLR7 823 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 ANKRD20A8PQ5CZ79 823 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 WDR44Q5JSH3 913 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 PIGWQ7Z7B1 504 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 PHLDB2Q86SQ0 1253 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 ZNF280CQ8ND82 737 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 CCT6BQ92526 530 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 SNF8Q96H20 258 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 CDHR1Q96JP9 859 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 CEP89Q96ST8 783 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 R3HDM2Q9Y2K5 976 aaKnown RBP16.25■□□□□ 0.19
HERC2-207ENST00000564734 ASAP2O43150 1006 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 STAM2O75886 525 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 ATG7O95352 703 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 MAN1A1P33908 653 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 SLCO1A2P46721 670 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 SP2Q02086 613 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 EMC2Q15006 297 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 ICE2Q659A1 982 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 MIS18BP1Q6P0N0 1132 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 EXOC3L1Q86VI1 746 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 ASAP3Q8TDY4 903 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 ZNF526Q8TF50 670 aaPredicted RBP16.25■□□□□ 0.19
HERC2-207ENST00000564734 STMN4Q9H169 189 aaPredicted RBP16.25■□□□□ 0.19
HERC2-207ENST00000564734 HACL1Q9UJ83 578 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 AGO2Q9UKV8 859 aaKnown RBP16.25■□□□□ 0.19
HERC2-207ENST00000564734 MAFBQ9Y5Q3 323 aaPredicted RBP16.25■□□□□ 0.19
HERC2-207ENST00000564734 KIAA1217Q5T5P2 1943 aa16.25■□□□□ 0.19
HERC2-207ENST00000564734 O00370 1275 aa16.24■□□□□ 0.19
HERC2-207ENST00000564734 RPS12P25398 132 aaKnown RBP16.24■□□□□ 0.19
HERC2-207ENST00000564734 NSFP46459 744 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms