RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 SNX27Q96L92 541 aa15.12■□□□□ 0.01
SPG7-206ENST00000562775 TSPAN18Q96SJ8 248 aa15.12■□□□□ 0.01
SPG7-206ENST00000562775 CRISPLD2Q9H0B8 497 aa15.12■□□□□ 0.01
SPG7-206ENST00000562775 PADI3Q9ULW8 664 aa15.12■□□□□ 0.01
SPG7-206ENST00000562775 HES2Q9Y543 173 aa15.12■□□□□ 0.01
SPG7-206ENST00000562775 IPPQ9Y573 584 aa15.12■□□□□ 0.01
SPG7-206ENST00000562775 RALGAPA2Q2PPJ7 1873 aa15.12■□□□□ 0.01
SPG7-206ENST00000562775 RECQL4O94761 1208 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 LCA5LO95447 670 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 SGPL1O95470 568 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 GHRP10912 638 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 ZSCAN20P17040 1043 aaPredicted RBP15.11■□□□□ 0.01
SPG7-206ENST00000562775 ANXA13P27216 316 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 CD52P31358 61 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 CLCN1P35523 988 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 LBX1P52954 281 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 NOP14P78316 857 aaKnown RBP15.11■□□□□ 0.01
SPG7-206ENST00000562775 PAK2Q13177 524 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 SPA17Q15506 151 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 ALKAL1Q6UXT8 129 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 FAM126BQ8IXS8 530 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 SMG8Q8ND04 991 aaKnown RBP15.11■□□□□ 0.01
SPG7-206ENST00000562775 CAGE1Q8TC20 777 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 TAF4BQ92750 862 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 JAKMIP2Q96AA8 810 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 ARMC5Q96C12 935 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 APOBEC3GQ9HC16 384 aaKnown RBP15.11■□□□□ 0.01
SPG7-206ENST00000562775 REXO2Q9Y3B8 237 aaKnown RBP15.11■□□□□ 0.01
SPG7-206ENST00000562775 OFD1O75665 1012 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 TBXAS1P24557 533 aaPredicted RBP15.11■□□□□ 0.01
SPG7-206ENST00000562775 CTCFP49711 727 aaPredicted RBP15.11■□□□□ 0.01
SPG7-206ENST00000562775 MYL6P60660 151 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 PTK2Q05397 1052 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 CUL2Q13617 745 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 SMYD5Q6GMV2 418 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 SPOPLQ6IQ16 392 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 TRAF7Q6Q0C0 670 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 FAM71AQ8IYT1 594 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 C1orf127Q8N9H9 656 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 U2AF1L4Q8WU68 220 aaKnown RBP15.11■□□□□ 0.01
SPG7-206ENST00000562775 ELMO3Q96BJ8 720 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 KIF12Q96FN5 646 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 TRAIPQ9BWF2 469 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 OSBPL7Q9BZF2 842 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 FAM105AQ9NUU6 356 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 CNTN3Q9P232 1028 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 SIX4Q9UIU6 781 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 NUB1Q9Y5A7 615 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 PCDHB2Q9Y5E7 798 aa15.11■□□□□ 0.01
SPG7-206ENST00000562775 RBAK-RBAKDNI3L0D1 243 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 CD4P01730 458 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 TFRCP02786 760 aaKnown RBP15.1■□□□□ 0.01
SPG7-206ENST00000562775 ITGB3P05106 788 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 KRT19P08727 400 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 AKAP5P24588 427 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 BFSP2Q13515 415 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 ZBTB6Q15916 424 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 SLC18A3Q16572 532 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 XKR4Q5GH76 650 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 SCARA3Q6AZY7 606 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 NYAP1Q6ZVC0 841 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 ZNF571Q7Z3V5 609 aaPredicted RBP15.1■□□□□ 0.01
SPG7-206ENST00000562775 VPS36Q86VN1 386 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 HACE1Q8IYU2 909 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 CXorf38Q8TB03 319 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 FAXDC2Q96IV6 333 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 APOL6Q9BWW8 343 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 XYLT2Q9H1B5 865 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 RNF39Q9H2S5 420 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 DPP3Q9NY33 737 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 PARP2Q9UGN5 583 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 ITGA11Q9UKX5 1188 aa15.1■□□□□ 0.01
SPG7-206ENST00000562775 ZNF263O14978 683 aa15.09■□□□□ 0.01
SPG7-206ENST00000562775 ATICP31939 592 aa15.09■□□□□ 0.01
SPG7-206ENST00000562775 USP8P40818 1118 aa15.09■□□□□ 0.01
SPG7-206ENST00000562775 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
SPG7-206ENST00000562775 RAB27AP51159 221 aa15.09■□□□□ 0.01
SPG7-206ENST00000562775 CYP27A1Q02318 531 aa15.09■□□□□ 0.01
SPG7-206ENST00000562775 GFPT1Q06210 699 aaPredicted RBP15.09■□□□□ 0.01
SPG7-206ENST00000562775 DSC3Q14574 896 aa15.09■□□□□ 0.01
SPG7-206ENST00000562775 PTPN14Q15678 1187 aa15.09■□□□□ 0.01
SPG7-206ENST00000562775 ZNF699Q32M78 642 aa15.09■□□□□ 0.01
SPG7-206ENST00000562775 ZMAT2Q96NC0 199 aaKnown RBP15.09■□□□□ 0.01
SPG7-206ENST00000562775 NIF3L1Q9GZT8 377 aa15.09■□□□□ 0.01
SPG7-206ENST00000562775 ADAMTS1Q9UHI8 967 aa15.09■□□□□ 0.01
SPG7-206ENST00000562775 UBQLN1Q9UMX0 589 aaKnown RBP15.09■□□□□ 0.01
SPG7-206ENST00000562775 R3HCC1Q9Y3T6 440 aaKnown RBP15.09■□□□□ 0.01
SPG7-206ENST00000562775 CENPFP49454 3210 aa15.09■□□□□ 0.01
SPG7-206ENST00000562775 TRIP11Q15643 1979 aa15.08■□□□□ 0.01
SPG7-206ENST00000562775 A0A087X0T9 212 aa15.08■□□□□ 0
SPG7-206ENST00000562775 TLR3O15455 904 aaKnown RBP15.08■□□□□ 0
SPG7-206ENST00000562775 XPOTO43592 962 aaKnown RBP15.08■□□□□ 0
SPG7-206ENST00000562775 ZNF623O75123 536 aa15.08■□□□□ 0
SPG7-206ENST00000562775 CLSTN1O94985 981 aa15.08■□□□□ 0
SPG7-206ENST00000562775 FAM228BP0C875 321 aa15.08■□□□□ 0
SPG7-206ENST00000562775 HSPA1AP0DMV8 641 aaKnown RBP15.08■□□□□ 0
SPG7-206ENST00000562775 HSPA1BP0DMV9 641 aaKnown RBP15.08■□□□□ 0
SPG7-206ENST00000562775 KCNE1P15382 129 aa15.08■□□□□ 0
SPG7-206ENST00000562775 SELPP16109 830 aa15.08■□□□□ 0
SPG7-206ENST00000562775 RBP5P82980 135 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms