RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 WNT8AQ9H1J5 351 aa9.14□□□□□ -0.95
CCDC33-209ENST00000560565 PAK6Q9NQU5 681 aaPredicted RBP9.14□□□□□ -0.95
CCDC33-209ENST00000560565 FBXO40Q9UH90 709 aa9.14□□□□□ -0.95
CCDC33-209ENST00000560565 SALL4Q9UJQ4 1053 aa9.14□□□□□ -0.95
CCDC33-209ENST00000560565 ATP8A1Q9Y2Q0 1164 aa9.14□□□□□ -0.95
CCDC33-209ENST00000560565 LRRC37A2A6NM11 1700 aa9.14□□□□□ -0.95
CCDC33-209ENST00000560565 LAMA2P24043 3122 aaKnown RBP9.13□□□□□ -0.95
CCDC33-209ENST00000560565 SOX1O00570 391 aaPredicted RBP9.13□□□□□ -0.95
CCDC33-209ENST00000560565 EPHB6O15197 1021 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 EIF3DO15371 548 aaKnown RBP eCLIP9.13□□□□□ -0.95
CCDC33-209ENST00000560565 P4HA2O15460 535 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 EDIL3O43854 480 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 GJB6O95452 261 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 EYA4O95677 639 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 FGGP02679 453 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 SSBP05455 408 aaKnown RBP eCLIP9.13□□□□□ -0.95
CCDC33-209ENST00000560565 ALAS1P13196 640 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 TMOD1P28289 359 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 SLC18A1P54219 525 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 SNAP25P60880 206 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 IL9RQ01113 521 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 PTK2Q05397 1052 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 MYO1EQ12965 1108 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 BNIP1Q12981 228 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 GRIK3Q13003 919 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 DYNC1I2Q13409 638 aaKnown RBP9.13□□□□□ -0.95
CCDC33-209ENST00000560565 MKRN4PQ13434 485 aaPredicted RBP9.13□□□□□ -0.95
CCDC33-209ENST00000560565 LBRQ14739 615 aaKnown RBP9.13□□□□□ -0.95
CCDC33-209ENST00000560565 KNOP1Q1ED39 458 aaKnown RBP9.13□□□□□ -0.95
CCDC33-209ENST00000560565 WASHC2DQ5SRD0 308 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 MAP3K21Q5TCX8 1036 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.13□□□□□ -0.95
CCDC33-209ENST00000560565 SPATA21Q7Z572 469 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 IRF2BP2Q7Z5L9 587 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 MFN1Q8IWA4 741 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 NPLOC4Q8TAT6 608 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 SLCO2A1Q92959 643 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 SPDL1Q96EA4 605 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 FAM81BQ96LP2 452 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 AGBL1Q96MI9 1066 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 MMTAG2Q9BU76 263 aaKnown RBP9.13□□□□□ -0.95
CCDC33-209ENST00000560565 STK33Q9BYT3 514 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 PHACTR1Q9C0D0 580 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 RAVER2Q9HCJ3 691 aaKnown RBP9.13□□□□□ -0.95
CCDC33-209ENST00000560565 ARHGEF3Q9NR81 526 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.13□□□□□ -0.95
CCDC33-209ENST00000560565 FLRT1Q9NZU1 646 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 KCND2Q9NZV8 630 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 WHRNQ9P202 907 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 LARSQ9P2J5 1176 aaKnown RBP9.13□□□□□ -0.95
CCDC33-209ENST00000560565 SEL1LQ9UBV2 794 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 AMACRQ9UHK6 382 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 PCDHA12Q9UN75 941 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 KAT6AQ92794 2004 aa9.13□□□□□ -0.95
CCDC33-209ENST00000560565 ZNF236Q9UL36 1845 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 TMEM265A0A087WTH1 108 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 TTI1O43156 1089 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 TBCAO75347 108 aaKnown RBP9.12□□□□□ -0.95
CCDC33-209ENST00000560565 STAM2O75886 525 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 TDP2O95551 362 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 GAS8O95995 478 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 FESP07332 822 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 PLA2G4BP0C869 781 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 ITIH2P19823 946 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 CNGA1P29973 690 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 SOX5P35711 763 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 PSMC2P35998 433 aaKnown RBP9.12□□□□□ -0.95
CCDC33-209ENST00000560565 ZNF76P36508 570 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 MSH2P43246 934 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 POU5F1Q01860 360 aaKnown RBP9.12□□□□□ -0.95
CCDC33-209ENST00000560565 ALCAMQ13740 583 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 BLMHQ13867 455 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 E2F5Q15329 346 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 SGSM1Q2NKQ1 1148 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 OLFML2BQ68BL8 750 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 SMYD5Q6GMV2 418 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 RNF207Q6ZRF8 634 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 DYMQ7RTS9 669 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 SESTD1Q86VW0 696 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 JAMLQ86YT9 394 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 ARHGAP24Q8N264 748 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 C12orf50Q8NA57 414 aaPredicted RBP9.12□□□□□ -0.95
CCDC33-209ENST00000560565 ZNF398Q8TD17 642 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 LRCH3Q96II8 777 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 FAXDC2Q96IV6 333 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 MAGEB18Q96M61 343 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 PNMA5Q96PV4 448 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 PLIN2Q99541 437 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 CRISPLD2Q9H0B8 497 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 DDX47Q9H0S4 455 aaKnown RBP9.12□□□□□ -0.95
CCDC33-209ENST00000560565 ACAD9Q9H845 621 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 ECT2Q9H8V3 914 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 KCNMB3Q9NPA1 279 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 RNF146Q9NTX7 359 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 NENFQ9UMX5 172 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 DNM3Q9UQ16 869 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 RIPK3Q9Y572 518 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 ARID2Q68CP9 1835 aa9.12□□□□□ -0.95
CCDC33-209ENST00000560565 EYSQ5T1H1 3165 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 CCDC189A1A4V9 331 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms