RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 NASPP49321 788 aaPredicted RBP16.07■□□□□ 0.16
IDH3A-219ENST00000560414 NOLC1Q14978 699 aaKnown RBP eCLIP16.07■□□□□ 0.16
IDH3A-219ENST00000560414 STK38Q15208 465 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 FOXD4L6Q3SYB3 417 aaPredicted RBP16.07■□□□□ 0.16
IDH3A-219ENST00000560414 XKR4Q5GH76 650 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 ATAT1Q5SQI0 421 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 RRAGBQ5VZM2 374 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 CD300LGQ6UXG3 332 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 FOXD4L3Q6VB84 417 aaPredicted RBP16.07■□□□□ 0.16
IDH3A-219ENST00000560414 ZPBP2Q6X784 338 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 DYMQ7RTS9 669 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 SNX27Q96L92 541 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 FIZ1Q96SL8 496 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 TTPALQ9BTX7 342 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 SFXN1Q9H9B4 322 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 MAN1C1Q9NR34 630 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 DAXXQ9UER7 740 aaPredicted RBP16.07■□□□□ 0.16
IDH3A-219ENST00000560414 TBX20Q9UMR3 447 aa16.07■□□□□ 0.16
IDH3A-219ENST00000560414 A0A087X0B3 334 aa16.06■□□□□ 0.16
IDH3A-219ENST00000560414 H0YCG3 227 aa16.06■□□□□ 0.16
IDH3A-219ENST00000560414 I3L4J1 428 aa16.06■□□□□ 0.16
IDH3A-219ENST00000560414 TBCAO75347 108 aaKnown RBP16.06■□□□□ 0.16
IDH3A-219ENST00000560414 B3GAT3O94766 335 aa16.06■□□□□ 0.16
IDH3A-219ENST00000560414 GLUD1P00367 558 aa16.06■□□□□ 0.16
IDH3A-219ENST00000560414 MCL1Q07820 350 aa16.06■□□□□ 0.16
IDH3A-219ENST00000560414 UPP1Q16831 310 aa16.06■□□□□ 0.16
IDH3A-219ENST00000560414 SLC10A6Q3KNW5 377 aa16.06■□□□□ 0.16
IDH3A-219ENST00000560414 HERC4Q5GLZ8 1057 aaPredicted RBP16.06■□□□□ 0.16
IDH3A-219ENST00000560414 DCLRE1AQ6PJP8 1040 aa16.06■□□□□ 0.16
IDH3A-219ENST00000560414 LINC00301Q8NCQ3 95 aa16.06■□□□□ 0.16
IDH3A-219ENST00000560414 C3orf58Q8NDZ4 430 aa16.06■□□□□ 0.16
IDH3A-219ENST00000560414 C18orf25Q96B23 403 aaPredicted RBP16.06■□□□□ 0.16
IDH3A-219ENST00000560414 RIPOR3Q96MK2 946 aa16.06■□□□□ 0.16
IDH3A-219ENST00000560414 NECTIN4Q96NY8 510 aa16.06■□□□□ 0.16
IDH3A-219ENST00000560414 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.06■□□□□ 0.16
IDH3A-219ENST00000560414 FNIP2Q9P278 1114 aa16.06■□□□□ 0.16
IDH3A-219ENST00000560414 STK17AQ9UEE5 414 aa16.06■□□□□ 0.16
IDH3A-219ENST00000560414 MORC2Q9Y6X9 1032 aaPredicted RBP16.06■□□□□ 0.16
IDH3A-219ENST00000560414 TRIOO75962 3097 aa16.05■□□□□ 0.16
IDH3A-219ENST00000560414 MYMKA6NI61 221 aa16.05■□□□□ 0.16
IDH3A-219ENST00000560414 TGM5O43548 720 aa16.05■□□□□ 0.16
IDH3A-219ENST00000560414 RFPL2O75678 378 aa16.05■□□□□ 0.16
IDH3A-219ENST00000560414 KCNE1P15382 129 aa16.05■□□□□ 0.16
IDH3A-219ENST00000560414 TXLNAP40222 546 aa16.05■□□□□ 0.16
IDH3A-219ENST00000560414 BRCC3P46736 316 aa16.05■□□□□ 0.16
IDH3A-219ENST00000560414 LIG4P49917 911 aa16.05■□□□□ 0.16
IDH3A-219ENST00000560414 PKP1Q13835 747 aa16.05■□□□□ 0.16
IDH3A-219ENST00000560414 ZC2HC1CQ53FD0 456 aaPredicted RBP16.05■□□□□ 0.16
IDH3A-219ENST00000560414 GPR149Q86SP6 731 aa16.05■□□□□ 0.16
IDH3A-219ENST00000560414 GPR65Q8IYL9 337 aa16.05■□□□□ 0.16
IDH3A-219ENST00000560414 TMEM130Q8N3G9 435 aa16.05■□□□□ 0.16
IDH3A-219ENST00000560414 LNX1Q8TBB1 728 aaPredicted RBP16.05■□□□□ 0.16
IDH3A-219ENST00000560414 KCNN1Q92952 543 aa16.05■□□□□ 0.16
IDH3A-219ENST00000560414 UROC1Q96N76 676 aa16.05■□□□□ 0.16
IDH3A-219ENST00000560414 REPIN1Q9BWE0 567 aaKnown RBP16.05■□□□□ 0.16
IDH3A-219ENST00000560414 CNTN3Q9P232 1028 aa16.05■□□□□ 0.16
IDH3A-219ENST00000560414 PLXNA3P51805 1871 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 CCDC195A0A1B0GUA6 201 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 C2CD4DB7Z1M9 353 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 TMEM189-UBE2V1I3L0A0 370 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 PODXLO00592 558 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 HNRNPDLO14979 420 aaKnown RBP16.04■□□□□ 0.16
IDH3A-219ENST00000560414 SPTLC2O15270 562 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 ADAM12O43184 909 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 ZSCAN22P10073 491 aaPredicted RBP16.04■□□□□ 0.16
IDH3A-219ENST00000560414 CXCL8P10145 99 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 TNFSF9P41273 254 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 SPAG1Q07617 926 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 ELAVL2Q12926 359 aaKnown RBP16.04■□□□□ 0.16
IDH3A-219ENST00000560414 PSMD5Q16401 504 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 ZBTB41Q5SVQ8 909 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 LILRA6Q6PI73 481 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 ADGRD1Q6QNK2 874 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 SV2BQ7L1I2 683 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 SFR1Q86XK3 245 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 PDILTQ8N807 584 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 PIK3R5Q8WYR1 880 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 ZNF396Q96N95 335 aaPredicted RBP16.04■□□□□ 0.16
IDH3A-219ENST00000560414 CLSTN3Q9BQT9 956 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 SLC38A7Q9NVC3 462 aa16.04■□□□□ 0.16
IDH3A-219ENST00000560414 CITO14578 2027 aa16.03■□□□□ 0.16
IDH3A-219ENST00000560414 TISP43B9A030 160 aa16.03■□□□□ 0.16
IDH3A-219ENST00000560414 ANKRD63C9JTQ0 380 aa16.03■□□□□ 0.16
IDH3A-219ENST00000560414 PIGRP01833 764 aa16.03■□□□□ 0.16
IDH3A-219ENST00000560414 FGFR3P22607 806 aa16.03■□□□□ 0.16
IDH3A-219ENST00000560414 TKTP29401 623 aaKnown RBP16.03■□□□□ 0.16
IDH3A-219ENST00000560414 STAT6P42226 847 aa16.03■□□□□ 0.16
IDH3A-219ENST00000560414 GTF2BQ00403 316 aa16.03■□□□□ 0.16
IDH3A-219ENST00000560414 SLC39A4Q6P5W5 647 aa16.03■□□□□ 0.16
IDH3A-219ENST00000560414 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.03■□□□□ 0.16
IDH3A-219ENST00000560414 CCDC73Q6ZRK6 1079 aa16.03■□□□□ 0.16
IDH3A-219ENST00000560414 DNAJC19Q96DA6 116 aa16.03■□□□□ 0.16
IDH3A-219ENST00000560414 TMUB1Q9BVT8 246 aa16.03■□□□□ 0.16
IDH3A-219ENST00000560414 IKZF4Q9H2S9 585 aa16.03■□□□□ 0.16
IDH3A-219ENST00000560414 TBC1D7Q9P0N9 293 aa16.03■□□□□ 0.16
IDH3A-219ENST00000560414 TUBGCP4Q9UGJ1 667 aa16.03■□□□□ 0.16
IDH3A-219ENST00000560414 NR2E1Q9Y466 385 aa16.03■□□□□ 0.16
IDH3A-219ENST00000560414 VWA8A3KMH1 1905 aa16.02■□□□□ 0.16
IDH3A-219ENST00000560414 FAM189A1O60320 539 aa16.02■□□□□ 0.16
IDH3A-219ENST00000560414 PPP6R2O75170 966 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms