RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 SLC26A4O43511 780 aa16.32■□□□□ 0.2
LRRC28-213ENST00000559399 ROR1Q01973 937 aa16.32■□□□□ 0.2
LRRC28-213ENST00000559399 MCL1Q07820 350 aa16.32■□□□□ 0.2
LRRC28-213ENST00000559399 ANGPT1Q15389 498 aa16.32■□□□□ 0.2
LRRC28-213ENST00000559399 PHLDB3Q6NSJ2 640 aa16.32■□□□□ 0.2
LRRC28-213ENST00000559399 PARM1Q6UWI2 310 aa16.32■□□□□ 0.2
LRRC28-213ENST00000559399 NPAS3Q8IXF0 933 aa16.32■□□□□ 0.2
LRRC28-213ENST00000559399 ZNF461Q8TAF7 563 aa16.32■□□□□ 0.2
LRRC28-213ENST00000559399 ITFG1Q8TB96 612 aa16.32■□□□□ 0.2
LRRC28-213ENST00000559399 HCFC1R1Q9NWW0 138 aa16.32■□□□□ 0.2
LRRC28-213ENST00000559399 LARSQ9P2J5 1176 aaKnown RBP16.32■□□□□ 0.2
LRRC28-213ENST00000559399 DNMT3BQ9UBC3 853 aaKnown RBP16.32■□□□□ 0.2
LRRC28-213ENST00000559399 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.32■□□□□ 0.2
LRRC28-213ENST00000559399 TDRD15B5MCY1 1934 aaKnown RBP16.31■□□□□ 0.2
LRRC28-213ENST00000559399 H7C4K7 107 aa16.31■□□□□ 0.2
LRRC28-213ENST00000559399 PRRG1O14668 218 aa16.31■□□□□ 0.2
LRRC28-213ENST00000559399 ELF1P32519 619 aa16.31■□□□□ 0.2
LRRC28-213ENST00000559399 MCM4P33991 863 aa16.31■□□□□ 0.2
LRRC28-213ENST00000559399 NCKAP1LP55160 1127 aa16.31■□□□□ 0.2
LRRC28-213ENST00000559399 CACNB1Q02641 598 aaPredicted RBP16.31■□□□□ 0.2
LRRC28-213ENST00000559399 SLC10A6Q3KNW5 377 aa16.31■□□□□ 0.2
LRRC28-213ENST00000559399 SEZ6Q53EL9 994 aa16.31■□□□□ 0.2
LRRC28-213ENST00000559399 FRMD5Q7Z6J6 570 aa16.31■□□□□ 0.2
LRRC28-213ENST00000559399 BICD1Q96G01 975 aa16.31■□□□□ 0.2
LRRC28-213ENST00000559399 RPP25Q9BUL9 199 aaKnown RBP16.31■□□□□ 0.2
LRRC28-213ENST00000559399 ODF2LQ9ULJ1 636 aa16.31■□□□□ 0.2
LRRC28-213ENST00000559399 MRPS23Q9Y3D9 190 aaKnown RBP16.31■□□□□ 0.2
LRRC28-213ENST00000559399 CACNA1HO95180 2353 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 C2orf16Q68DN1 1984 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 NPHP3-ACAD11A0A0J9YXS1 232 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 WDR27A2RRH5 827 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 PRR23AA6NEV1 266 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 TBC1D4O60343 1298 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 BMP15O95972 392 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 LRG1P02750 347 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 ATF2P15336 505 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 UBA7P41226 1012 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 MATR3P43243 847 aaKnown RBP eCLIP16.3■□□□□ 0.2
LRRC28-213ENST00000559399 ARPP19P56211 112 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 GPC5P78333 572 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 CTXN3Q4LDR2 81 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 LARP1BQ659C4 914 aaKnown RBP16.3■□□□□ 0.2
LRRC28-213ENST00000559399 ASCL5Q7RTU5 278 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 GPBP1Q86WP2 473 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 APPL2Q8NEU8 664 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 KCNN1Q92952 543 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 CALML4Q96GE6 196 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 SUSD3Q96L08 255 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 REEP2Q9BRK0 252 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 PLEKHA5Q9HAU0 1116 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 TUBGCP4Q9UGJ1 667 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 FBXL5Q9UKA1 691 aa16.3■□□□□ 0.2
LRRC28-213ENST00000559399 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.3■□□□□ 0.2
LRRC28-213ENST00000559399 ARHGEF37A1IGU5 675 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 ABLIM3O94929 683 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 RHOP08100 348 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 CLTAP09496 248 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 CXCL8P10145 99 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 SCP2P22307 547 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 LIG4P49917 911 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 MRPL58Q14197 206 aaKnown RBP16.29■□□□□ 0.2
LRRC28-213ENST00000559399 ARSHQ5FYA8 562 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 ZNF280DQ6N043 979 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 HAUS6Q7Z4H7 955 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 BRAPQ7Z569 592 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 RASSF8Q8NHQ8 419 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 ING5Q8WYH8 240 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 NKD2Q969F2 451 aaPredicted RBP16.29■□□□□ 0.2
LRRC28-213ENST00000559399 SHDQ96IW2 340 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 CYP4F11Q9HBI6 524 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 GDE1Q9NZC3 331 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 SIT1Q9Y3P8 196 aa16.29■□□□□ 0.2
LRRC28-213ENST00000559399 USP34Q70CQ2 3546 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 K7ENM7 598 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 HNRNPDLO14979 420 aaKnown RBP16.28■□□□□ 0.2
LRRC28-213ENST00000559399 FAM13AO94988 1023 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 PFKPQ01813 784 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 PPP2R3AQ06190 1150 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 KYAT1Q16773 422 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 SLC5A9Q2M3M2 681 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 SPECC1Q5M775 1068 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 TPGS2Q68CL5 300 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 TCEAL8Q8IYN2 117 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 DDX12PQ92771 950 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 TBC1D32Q96NH3 1257 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 KXD1Q9BQD3 176 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 HAPLN2Q9GZV7 340 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 PARVGQ9HBI0 331 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 AVENQ9NQS1 362 aaPredicted RBP16.28■□□□□ 0.2
LRRC28-213ENST00000559399 PCDHB8Q9UN66 801 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 INSL5Q9Y5Q6 135 aa16.28■□□□□ 0.2
LRRC28-213ENST00000559399 TTC26A0AVF1 554 aa16.27■□□□□ 0.2
LRRC28-213ENST00000559399 KRT18P05783 430 aaKnown RBP16.27■□□□□ 0.2
LRRC28-213ENST00000559399 DCNP07585 359 aaKnown RBP16.27■□□□□ 0.2
LRRC28-213ENST00000559399 PTPN2P17706 415 aa16.27■□□□□ 0.2
LRRC28-213ENST00000559399 PLCG1P19174 1290 aa16.27■□□□□ 0.2
LRRC28-213ENST00000559399 MARCKSP29966 332 aaPredicted RBP16.27■□□□□ 0.2
LRRC28-213ENST00000559399 LRPAP1P30533 357 aa16.27■□□□□ 0.2
LRRC28-213ENST00000559399 LONP1P36776 959 aaKnown RBP16.27■□□□□ 0.2
LRRC28-213ENST00000559399 ZNF131P52739 623 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms