RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 RIF1Q5UIP0 2472 aaKnown RBP22.42■■□□□ 1.18
TSPAN3-206ENST00000559373 FANCMQ8IYD8 2048 aa22.41■■□□□ 1.18
TSPAN3-206ENST00000559373 TICRRQ7Z2Z1 1910 aa22.41■■□□□ 1.18
TSPAN3-206ENST00000559373 TRAPPC3O43617 180 aa22.41■■□□□ 1.18
TSPAN3-206ENST00000559373 DCNP07585 359 aaKnown RBP22.41■■□□□ 1.18
TSPAN3-206ENST00000559373 ROR1Q01973 937 aa22.41■■□□□ 1.18
TSPAN3-206ENST00000559373 NOLC1Q14978 699 aaKnown RBP eCLIP22.41■■□□□ 1.18
TSPAN3-206ENST00000559373 TMEM119Q4V9L6 283 aa22.41■■□□□ 1.18
TSPAN3-206ENST00000559373 ANKS3Q6ZW76 656 aa22.41■■□□□ 1.18
TSPAN3-206ENST00000559373 ASCL5Q7RTU5 278 aa22.41■■□□□ 1.18
TSPAN3-206ENST00000559373 FRMD5Q7Z6J6 570 aa22.41■■□□□ 1.18
TSPAN3-206ENST00000559373 NTPCRQ9BSD7 190 aaKnown RBP22.41■■□□□ 1.18
TSPAN3-206ENST00000559373 IRF2BPLQ9H1B7 796 aa22.41■■□□□ 1.18
TSPAN3-206ENST00000559373 TBC1D17Q9HA65 648 aa22.41■■□□□ 1.18
TSPAN3-206ENST00000559373 FAM186AA6NE01 2351 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 WDR27A2RRH5 827 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 XYLBO75191 536 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 CXCL8P10145 99 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 KCNE1P15382 129 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 TNFSF9P41273 254 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 NUBP1P53384 320 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 SMTNP53814 917 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 GPC5P78333 572 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 DTWD2Q8NBA8 298 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 SPIRE2Q8WWL2 714 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 BICD1Q96G01 975 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 KXD1Q9BQD3 176 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 C17orf75Q9HAS0 396 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 SLC38A7Q9NVC3 462 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 CNTN3Q9P232 1028 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 NUB1Q9Y5A7 615 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 PATJQ8NI35 1801 aa22.4■■□□□ 1.18
TSPAN3-206ENST00000559373 KIF26AQ9ULI4 1882 aaPredicted RBP22.39■■□□□ 1.18
TSPAN3-206ENST00000559373 TOM1L1O75674 476 aa22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 HOXA9P31269 272 aa22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 GUCY2FP51841 1108 aa22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 KARSQ15046 597 aaKnown RBP22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 PABPC1LQ4VXU2 614 aaKnown RBP22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 ZBTB41Q5SVQ8 909 aa22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 POTEHQ6S545 545 aa22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 GPBP1Q86WP2 473 aa22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 CCDC105Q8IYK2 499 aa22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 NXPE3Q969Y0 559 aa22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 MCRS1Q96EZ8 462 aa22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 TBC1D32Q96NH3 1257 aa22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 RTP3Q9BQQ7 232 aa22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 REEP2Q9BRK0 252 aa22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 TIPINQ9BVW5 301 aa22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 FOXQ1Q9C009 403 aa22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 ZHX3Q9H4I2 956 aa22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 BACE2Q9Y5Z0 518 aa22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 ZNF638Q14966 1978 aaKnown RBP22.39■■□□□ 1.17
TSPAN3-206ENST00000559373 TSC2P49815 1807 aa22.38■■□□□ 1.17
TSPAN3-206ENST00000559373 SPTBN4Q9H254 2564 aa22.38■■□□□ 1.17
TSPAN3-206ENST00000559373 CLDN3O15551 220 aa22.38■■□□□ 1.17
TSPAN3-206ENST00000559373 LRRN2O75325 713 aa22.38■■□□□ 1.17
TSPAN3-206ENST00000559373 SEC24AO95486 1093 aa22.38■■□□□ 1.17
TSPAN3-206ENST00000559373 MCM4P33991 863 aa22.38■■□□□ 1.17
TSPAN3-206ENST00000559373 MCM6Q14566 821 aa22.38■■□□□ 1.17
TSPAN3-206ENST00000559373 ANGPT1Q15389 498 aa22.38■■□□□ 1.17
TSPAN3-206ENST00000559373 SLC5A9Q2M3M2 681 aa22.38■■□□□ 1.17
TSPAN3-206ENST00000559373 UVSSAQ2YD98 709 aa22.38■■□□□ 1.17
TSPAN3-206ENST00000559373 ARL6IP4Q66PJ3 421 aaKnown RBP22.38■■□□□ 1.17
TSPAN3-206ENST00000559373 UPF2Q9HAU5 1272 aaKnown RBP22.38■■□□□ 1.17
TSPAN3-206ENST00000559373 ARHGEF3Q9NR81 526 aa22.38■■□□□ 1.17
TSPAN3-206ENST00000559373 PRRG1O14668 218 aa22.37■■□□□ 1.17
TSPAN3-206ENST00000559373 RHOP08100 348 aa22.37■■□□□ 1.17
TSPAN3-206ENST00000559373 SNW1Q13573 536 aaKnown RBP22.37■■□□□ 1.17
TSPAN3-206ENST00000559373 CTXN3Q4LDR2 81 aa22.37■■□□□ 1.17
TSPAN3-206ENST00000559373 HAUS6Q7Z4H7 955 aa22.37■■□□□ 1.17
TSPAN3-206ENST00000559373 NPAS3Q8IXF0 933 aa22.37■■□□□ 1.17
TSPAN3-206ENST00000559373 ZNF461Q8TAF7 563 aa22.37■■□□□ 1.17
TSPAN3-206ENST00000559373 CYP4F11Q9HBI6 524 aa22.37■■□□□ 1.17
TSPAN3-206ENST00000559373 BLOC1S4Q9NUP1 217 aa22.37■■□□□ 1.17
TSPAN3-206ENST00000559373 FBXL5Q9UKA1 691 aa22.37■■□□□ 1.17
TSPAN3-206ENST00000559373 MRPS23Q9Y3D9 190 aaKnown RBP22.37■■□□□ 1.17
TSPAN3-206ENST00000559373 TIMM13Q9Y5L4 95 aaPredicted RBP22.37■■□□□ 1.17
TSPAN3-206ENST00000559373 NRG2O14511 850 aaPredicted RBP22.36■■□□□ 1.17
TSPAN3-206ENST00000559373 PLCG1P19174 1290 aa22.36■■□□□ 1.17
TSPAN3-206ENST00000559373 ELF1P32519 619 aa22.36■■□□□ 1.17
TSPAN3-206ENST00000559373 UBA7P41226 1012 aa22.36■■□□□ 1.17
TSPAN3-206ENST00000559373 NCKAP1LP55160 1127 aa22.36■■□□□ 1.17
TSPAN3-206ENST00000559373 MCL1Q07820 350 aa22.36■■□□□ 1.17
TSPAN3-206ENST00000559373 SF3A1Q15459 793 aaKnown RBP22.36■■□□□ 1.17
TSPAN3-206ENST00000559373 MYCT1Q8N699 235 aa22.36■■□□□ 1.17
TSPAN3-206ENST00000559373 TCEAL4Q96EI5 215 aa22.36■■□□□ 1.17
TSPAN3-206ENST00000559373 FAM212AQ96EL1 285 aa22.36■■□□□ 1.17
TSPAN3-206ENST00000559373 KIF12Q96FN5 646 aa22.36■■□□□ 1.17
TSPAN3-206ENST00000559373 CALML4Q96GE6 196 aa22.36■■□□□ 1.17
TSPAN3-206ENST00000559373 CORO1BQ9BR76 489 aa22.36■■□□□ 1.17
TSPAN3-206ENST00000559373 PLA2G2FQ9BZM2 168 aa22.36■■□□□ 1.17
TSPAN3-206ENST00000559373 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.36■■□□□ 1.17
TSPAN3-206ENST00000559373 VPS37CA5D8V6 355 aaPredicted RBP22.35■■□□□ 1.17
TSPAN3-206ENST00000559373 K7ENM7 598 aa22.35■■□□□ 1.17
TSPAN3-206ENST00000559373 TBC1D4O60343 1298 aa22.35■■□□□ 1.17
TSPAN3-206ENST00000559373 ABLIM3O94929 683 aa22.35■■□□□ 1.17
TSPAN3-206ENST00000559373 FAM13AO94988 1023 aa22.35■■□□□ 1.17
TSPAN3-206ENST00000559373 LRG1P02750 347 aa22.35■■□□□ 1.17
TSPAN3-206ENST00000559373 CEBPBP17676 345 aa22.35■■□□□ 1.17
TSPAN3-206ENST00000559373 RPL9P32969 192 aaKnown RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms