RNA–Protein interactions for RNA: ENST00000558968.1

CTDSPL2-205, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-205ENST00000558968 HAPLN2Q9GZV7 340 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 C17orf75Q9HAS0 396 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 SLC38A7Q9NVC3 462 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 CNTN3Q9P232 1028 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 DNMT3BQ9UBC3 853 aaKnown RBP11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 WNT16Q9UBV4 365 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 CDH7Q9ULB5 785 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 TOM1L1O75674 476 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 CXCL8P10145 99 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 KCNE1P15382 129 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 HOXA9P31269 272 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 MATR3P43243 847 aaKnown RBP eCLIP11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 SMTNP53814 917 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 ARPP19P56211 112 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 ROR1Q01973 937 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 GRIN1Q05586 938 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 SPAG1Q07617 926 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 UVSSAQ2YD98 709 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 SLC10A6Q3KNW5 377 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 ARSHQ5FYA8 562 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 LARP1BQ659C4 914 aaKnown RBP11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 CCDC105Q8IYK2 499 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 FGF13Q92913 245 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 NXPE3Q969Y0 559 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 BICD1Q96G01 975 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 RTP3Q9BQQ7 232 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 NTPCRQ9BSD7 190 aaKnown RBP11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 TBC1D17Q9HA65 648 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 UPF2Q9HAU5 1272 aaKnown RBP11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 DAXXQ9UER7 740 aaPredicted RBP11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 TUBGCP4Q9UGJ1 667 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 BACE2Q9Y5Z0 518 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 EP300Q09472 2414 aaPredicted RBP11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 GVINP1Q7Z2Y8 2422 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 TSC2P49815 1807 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 PATJQ8NI35 1801 aa11.3□□□□□ -0.6
CTDSPL2-205ENST00000558968 TICRRQ7Z2Z1 1910 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 FRYLO94915 3013 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 WDR27A2RRH5 827 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 CLDN3O15551 220 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 NCKAP1LP55160 1127 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 GPC5P78333 572 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 MCL1Q07820 350 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 KARSQ15046 597 aaKnown RBP11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 PABPC1LQ4VXU2 614 aaKnown RBP11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 SPECC1Q5M775 1068 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 ARL6IP4Q66PJ3 421 aaKnown RBP11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 SLC8B1Q6J4K2 584 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 ZPBP2Q6X784 338 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 ASCL5Q7RTU5 278 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 FRMD5Q7Z6J6 570 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 GPBP1Q86WP2 473 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 DTWD2Q8NBA8 298 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 REEP2Q9BRK0 252 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 ARHGEF3Q9NR81 526 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 KCND2Q9NZV8 630 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 NUB1Q9Y5A7 615 aa11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 ZFP37Q9Y6Q3 630 aaPredicted RBP11.29□□□□□ -0.6
CTDSPL2-205ENST00000558968 F5P12259 2224 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 ZNF292O60281 2723 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 PROB1E7EW31 1015 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 SYN3O14994 580 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 LRG1P02750 347 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 DCNP07585 359 aaKnown RBP11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 RHOP08100 348 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 POU2F2P09086 479 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 ELF1P32519 619 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 RPL9P32969 192 aaKnown RBP11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 MCM4P33991 863 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 UBA7P41226 1012 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 NBL1P41271 181 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 TNFSF9P41273 254 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 MCM2P49736 904 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 GUCY2FP51841 1108 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 MCM6Q14566 821 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 ANGPT1Q15389 498 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 SLC5A9Q2M3M2 681 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 CTXN3Q4LDR2 81 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 ZBTB41Q5SVQ8 909 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 HAUS6Q7Z4H7 955 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 NPAS3Q8IXF0 933 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 KCTD17Q8N5Z5 321 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 ZNF461Q8TAF7 563 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 MCRS1Q96EZ8 462 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 CALML4Q96GE6 196 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 SUSD3Q96L08 255 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 AK8Q96MA6 479 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 TBC1D32Q96NH3 1257 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 KXD1Q9BQD3 176 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 FOXQ1Q9C009 403 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 CYP4F11Q9HBI6 524 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 SLC2A4RGQ9NR83 387 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 BLOC1S4Q9NUP1 217 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 LARSQ9P2J5 1176 aaKnown RBP11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 FBXL5Q9UKA1 691 aa11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 MRPS23Q9Y3D9 190 aaKnown RBP11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 ZNF638Q14966 1978 aaKnown RBP11.28□□□□□ -0.6
CTDSPL2-205ENST00000558968 VPS37CA5D8V6 355 aaPredicted RBP11.27□□□□□ -0.61
CTDSPL2-205ENST00000558968 PRR23AA6NEV1 266 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms