RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 MBTD1Q05BQ5 628 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 TNK2Q07912 1038 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 EMC2Q15006 297 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 TEAD2Q15562 447 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 DGKKQ5KSL6 1271 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 STXBP5Q5T5C0 1151 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-206ENST00000558739 PDZD4Q76G19 769 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-206ENST00000558739 FERMT3Q86UX7 667 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 TEX2Q8IWB9 1127 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 MFSD6LQ8IWD5 586 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 CSGALNACT1Q8TDX6 532 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 SLC7A3Q8WY07 619 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 TCEANC2Q96MN5 208 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 DHX33Q9H6R0 707 aaKnown RBP13.2□□□□□ -0.3
SMAD3-206ENST00000558739 BRPF3Q9ULD4 1205 aa13.2□□□□□ -0.3
SMAD3-206ENST00000558739 PLXNB3Q9ULL4 1909 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 MYO16Q9Y6X6 1858 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 GOLGA4Q13439 2230 aaKnown RBP13.19□□□□□ -0.3
SMAD3-206ENST00000558739 hCG_1984214I3L0E3 225 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 INO80B-WBP1J3KQ70 363 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 EML1O00423 815 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 SEC24BO95487 1268 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 MYL4P12829 197 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 SIM1P81133 766 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-206ENST00000558739 RTN1Q16799 776 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 CD300LGQ6UXG3 332 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 SGMS1Q86VZ5 419 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 SMC5Q8IY18 1101 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 ZNF713Q8N859 430 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-206ENST00000558739 C3orf58Q8NDZ4 430 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 HNRNPLLQ8WVV9 542 aaKnown RBP13.19□□□□□ -0.3
SMAD3-206ENST00000558739 CHFRQ96EP1 664 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 CCDC51Q96ER9 411 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 CRELD1Q96HD1 420 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 TRPV4Q9HBA0 871 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 CEP72Q9P209 647 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 INVSQ9Y283 1065 aa13.19□□□□□ -0.3
SMAD3-206ENST00000558739 ADAMTS9Q9P2N4 1935 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 TTLL13PA6NNM8 815 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 PRRG1O14668 218 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 ZBTB39O15060 712 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 AKAP3O75969 853 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 TDP2O95551 362 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 ARPP19P56211 112 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 PTENP60484 403 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 FAM193AP78312 1265 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 IRX4P78413 519 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 FCHO2Q0JRZ9 810 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 SCAPQ12770 1279 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 TMTC2Q8N394 836 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 CHCHD4Q8N4Q1 142 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 SHKBP1Q8TBC3 707 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 ASAP3Q8TDY4 903 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 LRIG1Q96JA1 1093 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 CEP170P1Q96L14 293 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 MTA3Q9BTC8 594 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 MKNK1Q9BUB5 465 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 ZMYND12Q9H0C1 365 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 GLT8D2Q9H1C3 349 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 SLITRK6Q9H5Y7 841 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 C8orf33Q9H7E9 229 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-206ENST00000558739 XPNPEP1Q9NQW7 623 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 CACNA2D2Q9NY47 1150 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 INSL5Q9Y5Q6 135 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 NUP210Q8TEM1 1887 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-206ENST00000558739 KIAA1549LQ6ZVL6 1849 aa13.18□□□□□ -0.3
SMAD3-206ENST00000558739 CCDC163A0A0D9SF12 145 aa13.17□□□□□ -0.3
SMAD3-206ENST00000558739 ESYT2A0FGR8 921 aa13.17□□□□□ -0.3
SMAD3-206ENST00000558739 CHADO15335 359 aa13.17□□□□□ -0.3
SMAD3-206ENST00000558739 C1QL1O75973 258 aa13.17□□□□□ -0.3
SMAD3-206ENST00000558739 CHMLP26374 656 aa13.17□□□□□ -0.3
SMAD3-206ENST00000558739 BRCC3P46736 316 aa13.17□□□□□ -0.3
SMAD3-206ENST00000558739 MLLT6P55198 1093 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-206ENST00000558739 PSMC5P62195 406 aa13.17□□□□□ -0.3
SMAD3-206ENST00000558739 NUCB1Q02818 461 aa13.17□□□□□ -0.3
SMAD3-206ENST00000558739 CAPSQ13938 189 aa13.17□□□□□ -0.3
SMAD3-206ENST00000558739 PFKFB3Q16875 520 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-206ENST00000558739 NAIF1Q69YI7 327 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-206ENST00000558739 FSTL4Q6MZW2 842 aa13.17□□□□□ -0.3
SMAD3-206ENST00000558739 RALGPS2Q86X27 583 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-206ENST00000558739 YAF2Q8IY57 180 aa13.17□□□□□ -0.3
SMAD3-206ENST00000558739 RDM1Q8NG50 284 aa13.17□□□□□ -0.3
SMAD3-206ENST00000558739 FAM200AQ8TCP9 573 aa13.17□□□□□ -0.3
SMAD3-206ENST00000558739 JPH2Q9BR39 696 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-206ENST00000558739 CYP4F11Q9HBI6 524 aa13.17□□□□□ -0.3
SMAD3-206ENST00000558739 GOLGA2P5Q9HBQ8 144 aa13.17□□□□□ -0.3
SMAD3-206ENST00000558739 ANKFY1Q9P2R3 1169 aa13.17□□□□□ -0.3
SMAD3-206ENST00000558739 TNRC6BQ9UPQ9 1833 aaKnown RBP13.16□□□□□ -0.3
SMAD3-206ENST00000558739 TBX3O15119 743 aa13.16□□□□□ -0.3
SMAD3-206ENST00000558739 MEFVO15553 781 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-206ENST00000558739 SGSM2O43147 1006 aa13.16□□□□□ -0.3
SMAD3-206ENST00000558739 RECQL4O94761 1208 aa13.16□□□□□ -0.3
SMAD3-206ENST00000558739 MICAL2O94851 1124 aa13.16□□□□□ -0.3
SMAD3-206ENST00000558739 ABLIM3O94929 683 aa13.16□□□□□ -0.3
SMAD3-206ENST00000558739 AXLP30530 894 aa13.16□□□□□ -0.3
SMAD3-206ENST00000558739 GBP1P32455 592 aa13.16□□□□□ -0.3
SMAD3-206ENST00000558739 MAPK8P45983 427 aa13.16□□□□□ -0.3
SMAD3-206ENST00000558739 SPIRE1Q08AE8 756 aa13.16□□□□□ -0.3
SMAD3-206ENST00000558739 ELAVL2Q12926 359 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms