RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 LGR4Q9BXB1 951 aa7.86□□□□□ -1.15
MARK3-212ENST00000558223 COL25A1Q9BXS0 654 aaPredicted RBP7.86□□□□□ -1.15
MARK3-212ENST00000558223 NUCKS1Q9H1E3 243 aaKnown RBP7.86□□□□□ -1.15
MARK3-212ENST00000558223 CRISPLD1Q9H336 500 aa7.86□□□□□ -1.15
MARK3-212ENST00000558223 TRMT13Q9NUP7 481 aaKnown RBP7.86□□□□□ -1.15
MARK3-212ENST00000558223 APEX2Q9UBZ4 518 aa7.86□□□□□ -1.15
MARK3-212ENST00000558223 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.86□□□□□ -1.15
MARK3-212ENST00000558223 DDX25Q9UHL0 483 aaKnown RBP7.86□□□□□ -1.15
MARK3-212ENST00000558223 DNAI1Q9UI46 699 aa7.86□□□□□ -1.15
MARK3-212ENST00000558223 CTNND2Q9UQB3 1225 aa7.86□□□□□ -1.15
MARK3-212ENST00000558223 PPP2R2CQ9Y2T4 447 aa7.86□□□□□ -1.15
MARK3-212ENST00000558223 PCDHA1Q9Y5I3 950 aa7.86□□□□□ -1.15
MARK3-212ENST00000558223 A0A1W2PQJ5 194 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 BLACEA4D250 179 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 SPDYE3A6NKU9 549 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 CHURC1-FNTBB4DL54 471 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 F5H6K3 240 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 PPIP5K2O43314 1243 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 XPOTO43592 962 aaKnown RBP7.85□□□□□ -1.15
MARK3-212ENST00000558223 KIF5CO60282 957 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 CYP3A4P08684 503 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 RBP3P10745 1247 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 BMP3P12645 472 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 VEGFAP15692 232 aaPredicted RBP7.85□□□□□ -1.15
MARK3-212ENST00000558223 RHCEP18577 417 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 RRM1P23921 792 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 POLR2BP30876 1174 aaKnown RBP7.85□□□□□ -1.15
MARK3-212ENST00000558223 CASQ1P31415 396 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 MAPK9P45984 424 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 BAG6P46379 1132 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 LSSP48449 732 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 ATP11AP98196 1134 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 CDK17Q00537 523 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 OCRLQ01968 901 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 RHDQ02161 417 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 KLRC3Q07444 240 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 ODF1Q14990 250 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 DLGAP5Q15398 846 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 PLA2G4EQ3MJ16 856 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 Q4G0T1 1027 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 TMEM119Q4V9L6 283 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 RNFT1Q5M7Z0 435 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 TMEM201Q5SNT2 666 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 CENPPQ6IPU0 288 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 RASGRP2Q7LDG7 609 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 MAMDC2Q7Z304 686 aaPredicted RBP7.85□□□□□ -1.15
MARK3-212ENST00000558223 LYSMD3Q7Z3D4 306 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 SRGAP1Q7Z6B7 1085 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 PDZD3Q86UT5 571 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 CCDC170Q8IYT3 715 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 CSGALNACT2Q8N6G5 542 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 MB21D1Q8N884 522 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 BVESQ8NE79 360 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 SLC35G2Q8TBE7 412 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 RAD54LQ92698 747 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 ELMO3Q96BJ8 720 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 GBP3Q9H0R5 595 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 BLZF1Q9H2G9 400 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 RUBCNLQ9H714 662 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 DBNDD1Q9H9R9 158 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 GPAMQ9HCL2 828 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 INTS13Q9NVM9 706 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 ARGLU1Q9NWB6 273 aaPredicted RBP7.85□□□□□ -1.15
MARK3-212ENST00000558223 TRMT1Q9NXH9 659 aaKnown RBP7.85□□□□□ -1.15
MARK3-212ENST00000558223 CAPN11Q9UMQ6 739 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 PCDHGB3Q9Y5G1 929 aa7.85□□□□□ -1.15
MARK3-212ENST00000558223 MYH1P12882 1939 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 EFCAB8A8MWE9 144 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 ATP8B1O43520 1251 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 AP1G1O43747 822 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 SNX2O60749 519 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 HIP1RO75146 1068 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 SMNDC1O75940 238 aaKnown RBP eCLIP7.84□□□□□ -1.15
MARK3-212ENST00000558223 ZRANB2O95218 330 aaKnown RBP eCLIP7.84□□□□□ -1.15
MARK3-212ENST00000558223 GHRHP01286 108 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 CYLC1P35663 651 aaPredicted RBP7.84□□□□□ -1.15
MARK3-212ENST00000558223 USP14P54578 494 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 NRLP54845 237 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 STX17P56962 302 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 TGFB2P61812 414 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 UBXN1Q04323 297 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 TNFAIP1Q13829 316 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 INPP5AQ14642 412 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 CDC37Q16543 378 aaPredicted RBP7.84□□□□□ -1.15
MARK3-212ENST00000558223 QRICH1Q2TAL8 776 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 TTI2Q6NXR4 508 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 LRFN4Q6PJG9 635 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 TMEM139Q8IV31 216 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 REXO1L1PQ8IX06 675 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 SDR16C5Q8N3Y7 309 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 SMC1BQ8NDV3 1235 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 MNS1Q8NEH6 495 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 GPBAR1Q8TDU6 330 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 KCTD13Q8WZ19 329 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 COA7Q96BR5 231 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 CCDC138Q96M89 665 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 SLC6A18Q96N87 628 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 MED15Q96RN5 788 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 ERGIC2Q96RQ1 377 aa7.84□□□□□ -1.15
MARK3-212ENST00000558223 POP1Q99575 1024 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms