RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 NOLC1Q14978 699 aaKnown RBP eCLIP13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 KNOP1Q1ED39 458 aaKnown RBP13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 ARMCX5Q6P1M9 558 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 SASS6Q6UVJ0 657 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 LYSMD3Q7Z3D4 306 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 APBB1IPQ7Z5R6 666 aaPredicted RBP13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 KCNN1Q92952 543 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 CCDC51Q96ER9 411 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 HAPLN2Q9GZV7 340 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 GBP3Q9H0R5 595 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 CDT1Q9H211 546 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 PTPRHQ9HD43 1115 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 PARP2Q9UGN5 583 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 IPPQ9Y573 584 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 TTC3P53804 2025 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 UBE4BO95155 1302 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 ZMYM2Q9UBW7 1377 aa13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 TGFB1I1O43294 461 aa13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 STAG3L1P0CL83 205 aa13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 ITGA4P13612 1032 aa13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 PROZP22891 400 aa13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 AKAP5P24588 427 aa13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 BMT2Q1RMZ1 405 aa13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 DCAF4L1Q3SXM0 396 aa13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 SLFN12LQ6IEE8 588 aa13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 HS2ST1Q7LGA3 356 aa13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 GUF1Q8N442 669 aaKnown RBP13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 CEP120Q8N960 986 aa13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 TRIML1Q8N9V2 468 aa13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 SMG8Q8ND04 991 aaKnown RBP13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 CBWD1Q9BRT8 395 aa13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 MSTO1Q9BUK6 570 aa13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 GTPBP4Q9BZE4 634 aaKnown RBP13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 NXF3Q9H4D5 531 aaKnown RBP13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 SNTG2Q9NY99 539 aa13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 KLK14Q9P0G3 267 aa13.1□□□□□ -0.31
HMGB1P8-201ENST00000558211 PTPRSQ13332 1948 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 GOLGA8IPA6NC78 632 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 GOLGA8JA6NMD2 632 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 MEIS3P2A8K0S8 358 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 GRXCR1A8MXD5 290 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 ABLIM1O14639 778 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 CALUO43852 315 aaPredicted RBP13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 MCF2P10911 925 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 FGFR1P11362 822 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 ATP2A2P16615 1042 aaKnown RBP13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 ADSSP30520 456 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 BMP8BP34820 402 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 GATMP50440 423 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 RAB27AP51159 221 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 CYP2J2P51589 502 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 STX17P56962 302 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 NLRP12P59046 1061 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 FAM189BP81408 668 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 MCL1Q07820 350 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 RBM43Q6ZSC3 357 aaKnown RBP13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 NPAS4Q8IUM7 802 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 TMEM192Q8IY95 271 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 HACE1Q8IYU2 909 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 ADSSL1Q8N142 457 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 TOP1MTQ969P6 601 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 PGBD4Q96DM1 585 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 SAAL1Q96ER3 474 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 KCTD10Q9H3F6 313 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 SEMA6BQ9H3T3 888 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 AGPAT3Q9NRZ7 376 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 RNF19AQ9NV58 838 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 TYW1Q9NV66 732 aaKnown RBP13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 TMEM161AQ9NX61 479 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 AGO2Q9UKV8 859 aaKnown RBP13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 CTNND2Q9UQB3 1225 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 INPP5FQ9Y2H2 1132 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 TRIP11Q15643 1979 aa13.09□□□□□ -0.31
HMGB1P8-201ENST00000558211 A0A0B4J269 797 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 SYCE3A1L190 88 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 TRIM49BA6NDI0 452 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 PSMA7O14818 248 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 OGTO15294 1046 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 ZNF623O75123 536 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 EOMESO95936 686 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 ATF7P17544 494 aaPredicted RBP13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 GARTP22102 1010 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 TNFSF9P41273 254 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 ACOT2P49753 483 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 RABGGTBP53611 331 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 EPHA4P54764 986 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 TLR1Q15399 786 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 DPCR1Q3MIW9 517 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 PAN2Q504Q3 1202 aaKnown RBP13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 ZBTB41Q5SVQ8 909 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 RASIP1Q5U651 963 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 AGMOQ6ZNB7 445 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 FAM43BQ6ZT52 329 aaPredicted RBP13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 MRPL10Q7Z7H8 261 aaKnown RBP13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 TDHQ8IZJ6 230 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 ZSWIM2Q8NEG5 633 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 HELQQ8TDG4 1101 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 NELFBQ8WX92 580 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 SLC9A7Q96T83 725 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 FAM213AQ9BRX8 229 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms