RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 NAIF1Q69YI7 327 aaPredicted RBP10.75□□□□□ -0.69
IGKV2D-28-202ENST00000558026 PDXDC1Q6P996 788 aa10.75□□□□□ -0.69
IGKV2D-28-202ENST00000558026 RTL10Q7L3V2 364 aa10.75□□□□□ -0.69
IGKV2D-28-202ENST00000558026 SMAP1Q8IYB5 467 aaPredicted RBP10.75□□□□□ -0.69
IGKV2D-28-202ENST00000558026 SRBD1Q8N5C6 995 aaKnown RBP10.75□□□□□ -0.69
IGKV2D-28-202ENST00000558026 DAGLBQ8NCG7 672 aa10.75□□□□□ -0.69
IGKV2D-28-202ENST00000558026 CNNM3Q8NE01 707 aa10.75□□□□□ -0.69
IGKV2D-28-202ENST00000558026 CHFRQ96EP1 664 aa10.75□□□□□ -0.69
IGKV2D-28-202ENST00000558026 CPB2Q96IY4 423 aa10.75□□□□□ -0.69
IGKV2D-28-202ENST00000558026 ZNF577Q9BSK1 485 aa10.75□□□□□ -0.69
IGKV2D-28-202ENST00000558026 FBRSL1Q9HCM7 1045 aaKnown RBP10.75□□□□□ -0.69
IGKV2D-28-202ENST00000558026 EBF1Q9UH73 591 aa10.75□□□□□ -0.69
IGKV2D-28-202ENST00000558026 SEPT9Q9UHD8 586 aaPredicted RBP10.75□□□□□ -0.69
IGKV2D-28-202ENST00000558026 DNMT3LQ9UJW3 386 aa10.75□□□□□ -0.69
IGKV2D-28-202ENST00000558026 PCDH15Q96QU1 1955 aa10.75□□□□□ -0.69
IGKV2D-28-202ENST00000558026 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 OPHN1O60890 802 aa10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 SREBF1P36956 1147 aa10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 CACNB1Q02641 598 aaPredicted RBP10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 SPIRE1Q08AE8 756 aa10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 GRSF1Q12849 480 aaKnown RBP eCLIP10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 GRIK3Q13003 919 aa10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 IMMTQ16891 758 aaKnown RBP10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 USP39Q53GS9 565 aaKnown RBP10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 STXBP5Q5T5C0 1151 aa10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 SLC23A3Q6PIS1 610 aa10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 TOGARAM2Q6ZUX3 1019 aa10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 NIPA1Q7RTP0 329 aa10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 HEATR3Q7Z4Q2 680 aa10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 MINDY1Q8N5J2 469 aa10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 RPLP0P6Q8NHW5 317 aa10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 SHKBP1Q8TBC3 707 aa10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 SEMA4CQ9C0C4 833 aa10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 POLMQ9NP87 494 aaPredicted RBP10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 SALL3Q9BXA9 1300 aa10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 KIAA1549LQ6ZVL6 1849 aa10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 HELZP42694 1942 aaKnown RBP10.74□□□□□ -0.69
IGKV2D-28-202ENST00000558026 TSC2P49815 1807 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 DOPEY1Q5JWR5 2465 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 SRGAP2CP0DJJ0 459 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 U2AF2P26368 475 aaKnown RBP eCLIP10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 ROR1Q01973 937 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 MAPK6Q16659 721 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 COLEC12Q5KU26 742 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 TYW1BQ6NUM6 668 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 CATIPQ7Z7H3 387 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 SYT12Q8IV01 421 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 ARID3BQ8IVW6 561 aaPredicted RBP10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 CCDC82Q8N4S0 544 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 FRMD1Q8N878 549 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 RLN3Q8WXF3 142 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 E2F7Q96AV8 911 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 ARID3AQ99856 593 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 CYP4F11Q9HBI6 524 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 DISC1Q9NRI5 854 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 TBC1D22BQ9NU19 505 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 CEP72Q9P209 647 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 GIT1Q9Y2X7 761 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 PCDHB9Q9Y5E1 797 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 COL4A3BPQ9Y5P4 624 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 INSL5Q9Y5Q6 135 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 STK24Q9Y6E0 443 aa10.73□□□□□ -0.69
IGKV2D-28-202ENST00000558026 FAM149AA5PLN7 773 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 OTOL1A6NHN0 477 aaPredicted RBP10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 WDR64B1ANS9 1081 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 CHMP2AO43633 222 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 STBD1O95210 358 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 PRKCBP05771 671 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 FGFR3P22607 806 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 ITPKAP23677 461 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 TKTP29401 623 aaKnown RBP10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 ELF1P32519 619 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 EIF2S3P41091 472 aaKnown RBP10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 ARPP19P56211 112 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 TUSC3Q13454 348 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 CAMK2BQ13554 666 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 HNRNPDQ14103 355 aaKnown RBP10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 ITPRIPL2Q3MIP1 535 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 ARHGAP29Q52LW3 1261 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 ANO7Q6IWH7 933 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 SYT13Q7L8C5 426 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 TMPRSS7Q7RTY8 843 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 CDR2LQ86X02 465 aaPredicted RBP10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 CTCFLQ8NI51 663 aaPredicted RBP10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 ZNF461Q8TAF7 563 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 SPATA18Q8TC71 538 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 DDX27Q96GQ7 796 aaKnown RBP10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 NIFKQ9BYG3 293 aaKnown RBP10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 CXCL16Q9H2A7 254 aa10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 APOBEC2Q9Y235 224 aaKnown RBP10.72□□□□□ -0.69
IGKV2D-28-202ENST00000558026 A0A1W2PRU2 124 aa10.71□□□□□ -0.69
IGKV2D-28-202ENST00000558026 I3L4J1 428 aa10.71□□□□□ -0.69
IGKV2D-28-202ENST00000558026 TRDMT1O14717 391 aaKnown RBP10.71□□□□□ -0.69
IGKV2D-28-202ENST00000558026 TNFRSF10BO14763 440 aa10.71□□□□□ -0.69
IGKV2D-28-202ENST00000558026 TSPAN1O60635 241 aa10.71□□□□□ -0.69
IGKV2D-28-202ENST00000558026 MAFO75444 373 aaPredicted RBP10.71□□□□□ -0.69
IGKV2D-28-202ENST00000558026 KRT10P13645 584 aa10.71□□□□□ -0.69
IGKV2D-28-202ENST00000558026 RXRAP19793 462 aa10.71□□□□□ -0.69
IGKV2D-28-202ENST00000558026 MFAP1P55081 439 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms