RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 PHKA2P46019 1235 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 SATB1Q01826 763 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 SUZ12Q15022 739 aaKnown RBP7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 CCDC6Q16204 474 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 MCMDC2Q4G0Z9 681 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 GRASPQ7Z6J2 395 aaPredicted RBP7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 PDZD3Q86UT5 571 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 PALB2Q86YC2 1186 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 MYRIPQ8NFW9 859 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 URGCPQ8TCY9 931 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 DNASE1L2Q92874 299 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 LPPQ93052 612 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 INTS4Q96HW7 963 aaKnown RBP7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 SCLT1Q96NL6 688 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 TMEM175Q9BSA9 504 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 RBSNQ9H1K0 784 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 RXFP1Q9HBX9 757 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 CHST12Q9NRB3 414 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 KCNH7Q9NS40 1196 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 FAN1Q9Y2M0 1017 aa7.62□□□□□ -1.19
SPTLC2-206ENST00000557566 TICRRQ7Z2Z1 1910 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 IGKV6D-21A0A0A0MT36 114 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 ZBTB42B2RXF5 422 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 GIPC1O14908 333 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 ECI2O75521 394 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 LETM1O95202 739 aaPredicted RBP7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 EPN2O95208 641 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 TOP3BO95985 862 aaKnown RBP7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 TPM3P06753 285 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 GMPRP36959 345 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 RAB27AP51159 221 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 CLCN3P51790 818 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 ANAPC15P60006 121 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 CENPCQ03188 943 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 SLC35G1Q2M3R5 365 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 LONRF3Q496Y0 759 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 DAB2IPQ5VWQ8 1189 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 HEATR6Q6AI08 1181 aaKnown RBP7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 MCTP1Q6DN14 999 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 TWF2Q6IBS0 349 aaKnown RBP7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 CAVIN1Q6NZI2 390 aaKnown RBP7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 ZNF280BQ86YH2 543 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 CKAP2LQ8IYA6 745 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 ZNF295-AS1Q8N0V1 137 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 CCDC94Q9BW85 323 aaPredicted RBP7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 TSPAN10Q9H1Z9 355 aaPredicted RBP7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 LMAN1LQ9HAT1 526 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 ZNF302Q9NR11 478 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 ZSWIM5Q9P217 1185 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 KANSL3Q9P2N6 904 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 CEP131Q9UPN4 1083 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 R3HCC1Q9Y3T6 440 aaKnown RBP7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 NEUROG3Q9Y4Z2 214 aa7.61□□□□□ -1.19
SPTLC2-206ENST00000557566 CELSR3Q9NYQ7 3312 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 PDCD11Q14690 1871 aaKnown RBP7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 A0A0D9SFI3 127 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 SPDYE3A6NKU9 549 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 SHISA7A6NL88 538 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 NRP1O14786 923 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 MAGEB2O15479 319 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 CYTH3O43739 400 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 B4GALT3O60512 393 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 DDHD2O94830 711 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 PAPSS2O95340 614 aaPredicted RBP7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 HNRNPA1P09651 372 aaKnown RBP eCLIP7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 CEACAM1P13688 526 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 DARSP14868 501 aaKnown RBP7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 GSPT1P15170 499 aaKnown RBP7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 FGFR4P22455 802 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 LORP23490 312 aaPredicted RBP7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 KIF5BP33176 963 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 NTHL1P78549 312 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 DSG1Q02413 1049 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 CUL4AQ13619 759 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 GRM4Q14833 912 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 SH3PXD2AQ5TCZ1 1133 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 LIN9Q5TKA1 542 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 C19orf48Q6RUI8 117 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 TAS1R1Q7RTX1 841 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 ZNF589Q86UQ0 364 aaPredicted RBP7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 CCDC60Q8IWA6 550 aaPredicted RBP7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 SPEM1Q8N4L4 309 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 SCG3Q8WXD2 468 aaKnown RBP7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 FAM3CQ92520 227 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 EVI5LQ96CN4 794 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 PGBD4Q96DM1 585 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 FAM227BQ96M60 508 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 EDEM2Q9BV94 578 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 GTPBP4Q9BZE4 634 aaKnown RBP7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 KRT23Q9C075 422 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 VPS45Q9NRW7 570 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 FAM105AQ9NUU6 356 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 EGFL7Q9UHF1 273 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 PCDHGA5Q9Y5G8 931 aa7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 TDRD15B5MCY1 1934 aaKnown RBP7.6□□□□□ -1.19
SPTLC2-206ENST00000557566 NOTCH4Q99466 2003 aa7.59□□□□□ -1.19
SPTLC2-206ENST00000557566 COL4A2P08572 1712 aa7.59□□□□□ -1.19
SPTLC2-206ENST00000557566 C4orf47A7E2U8 309 aa7.59□□□□□ -1.19
SPTLC2-206ENST00000557566 MEIS3P2A8K0S8 358 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms