RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 DERAQ9Y315 318 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 TRIP11Q15643 1979 aa25.6■■□□□ 1.69
SIX4-203ENST00000556952 LRRC53A6NM62 1247 aa25.6■■□□□ 1.69
SIX4-203ENST00000556952 MEFVO15553 781 aaPredicted RBP25.6■■□□□ 1.69
SIX4-203ENST00000556952 MEA1Q16626 185 aa25.6■■□□□ 1.69
SIX4-203ENST00000556952 C9orf50Q5SZB4 431 aa25.6■■□□□ 1.69
SIX4-203ENST00000556952 DEFB128Q7Z7B8 93 aa25.6■■□□□ 1.69
SIX4-203ENST00000556952 HACE1Q8IYU2 909 aa25.6■■□□□ 1.69
SIX4-203ENST00000556952 SNX27Q96L92 541 aa25.6■■□□□ 1.69
SIX4-203ENST00000556952 TRAIPQ9BWF2 469 aa25.6■■□□□ 1.69
SIX4-203ENST00000556952 IL23AQ9NPF7 189 aa25.6■■□□□ 1.69
SIX4-203ENST00000556952 IPPQ9Y573 584 aa25.6■■□□□ 1.69
SIX4-203ENST00000556952 ARHGAP6O43182 974 aa25.59■■□□□ 1.69
SIX4-203ENST00000556952 NBNO60934 754 aa25.59■■□□□ 1.69
SIX4-203ENST00000556952 PHACTR2O75167 634 aa25.59■■□□□ 1.69
SIX4-203ENST00000556952 HLA-DRAP01903 254 aa25.59■■□□□ 1.69
SIX4-203ENST00000556952 RAB27AP51159 221 aa25.59■■□□□ 1.69
SIX4-203ENST00000556952 TFAMQ00059 246 aaKnown RBP25.59■■□□□ 1.69
SIX4-203ENST00000556952 JADE1Q6IE81 842 aa25.59■■□□□ 1.69
SIX4-203ENST00000556952 IQCEQ6IPM2 695 aa25.59■■□□□ 1.69
SIX4-203ENST00000556952 PHLDB3Q6NSJ2 640 aa25.59■■□□□ 1.69
SIX4-203ENST00000556952 FAM43BQ6ZT52 329 aaPredicted RBP25.59■■□□□ 1.69
SIX4-203ENST00000556952 TRAPPC11Q7Z392 1133 aa25.59■■□□□ 1.69
SIX4-203ENST00000556952 FMNL3Q8IVF7 1028 aa25.59■■□□□ 1.69
SIX4-203ENST00000556952 FAM81BQ96LP2 452 aa25.59■■□□□ 1.69
SIX4-203ENST00000556952 NT5C1BQ96P26 610 aa25.59■■□□□ 1.69
SIX4-203ENST00000556952 SPAG5Q96R06 1193 aa25.59■■□□□ 1.69
SIX4-203ENST00000556952 TSPAN18Q96SJ8 248 aa25.59■■□□□ 1.69
SIX4-203ENST00000556952 FAM105AQ9NUU6 356 aa25.59■■□□□ 1.69
SIX4-203ENST00000556952 RECQL4O94761 1208 aa25.58■■□□□ 1.69
SIX4-203ENST00000556952 VNN1O95497 513 aa25.58■■□□□ 1.69
SIX4-203ENST00000556952 TMEM132DQ14C87 1099 aa25.58■■□□□ 1.69
SIX4-203ENST00000556952 CYP26C1Q6V0L0 522 aa25.58■■□□□ 1.69
SIX4-203ENST00000556952 TMTC1Q8IUR5 882 aa25.58■■□□□ 1.69
SIX4-203ENST00000556952 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.58■■□□□ 1.69
SIX4-203ENST00000556952 CNTN3Q9P232 1028 aa25.58■■□□□ 1.69
SIX4-203ENST00000556952 DNAJC12Q9UKB3 198 aa25.58■■□□□ 1.69
SIX4-203ENST00000556952 NFICP08651 508 aa25.57■■□□□ 1.68
SIX4-203ENST00000556952 KCNJ6P48051 423 aa25.57■■□□□ 1.68
SIX4-203ENST00000556952 JAM2P57087 298 aa25.57■■□□□ 1.68
SIX4-203ENST00000556952 CDK17Q00537 523 aa25.57■■□□□ 1.68
SIX4-203ENST00000556952 NCOA4Q13772 614 aa25.57■■□□□ 1.68
SIX4-203ENST00000556952 DSC3Q14574 896 aa25.57■■□□□ 1.68
SIX4-203ENST00000556952 WDR44Q5JSH3 913 aa25.57■■□□□ 1.68
SIX4-203ENST00000556952 SMG8Q8ND04 991 aaKnown RBP25.57■■□□□ 1.68
SIX4-203ENST00000556952 FAM84AQ96KN4 292 aa25.57■■□□□ 1.68
SIX4-203ENST00000556952 STK33Q9BYT3 514 aa25.57■■□□□ 1.68
SIX4-203ENST00000556952 IMPG2Q9BZV3 1241 aa25.57■■□□□ 1.68
SIX4-203ENST00000556952 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.57■■□□□ 1.68
SIX4-203ENST00000556952 HES2Q9Y543 173 aa25.57■■□□□ 1.68
SIX4-203ENST00000556952 PCDHB2Q9Y5E7 798 aa25.57■■□□□ 1.68
SIX4-203ENST00000556952 RFC2P35250 354 aa25.56■■□□□ 1.68
SIX4-203ENST00000556952 RAPGEF1Q13905 1077 aa25.56■■□□□ 1.68
SIX4-203ENST00000556952 SHHQ15465 462 aa25.56■■□□□ 1.68
SIX4-203ENST00000556952 TMEM240Q5SV17 173 aa25.56■■□□□ 1.68
SIX4-203ENST00000556952 SFMBT2Q5VUG0 894 aa25.56■■□□□ 1.68
SIX4-203ENST00000556952 GJB7Q6PEY0 223 aa25.56■■□□□ 1.68
SIX4-203ENST00000556952 ALKAL1Q6UXT8 129 aa25.56■■□□□ 1.68
SIX4-203ENST00000556952 C1orf112Q9NSG2 853 aa25.56■■□□□ 1.68
SIX4-203ENST00000556952 XKR4Q5GH76 650 aa25.56■■□□□ 1.68
SIX4-203ENST00000556952 WDR59Q6PJI9 974 aa25.56■■□□□ 1.68
SIX4-203ENST00000556952 ZNF365Q70YC5 407 aa25.56■■□□□ 1.68
SIX4-203ENST00000556952 ENOSF1Q7L5Y1 443 aa25.56■■□□□ 1.68
SIX4-203ENST00000556952 ARHGEF19Q8IW93 802 aa25.56■■□□□ 1.68
SIX4-203ENST00000556952 IFIH1Q9BYX4 1025 aaKnown RBP25.56■■□□□ 1.68
SIX4-203ENST00000556952 AIPL1Q9NZN9 384 aa25.56■■□□□ 1.68
SIX4-203ENST00000556952 AJAP1Q9UKB5 411 aaPredicted RBP25.56■■□□□ 1.68
SIX4-203ENST00000556952 LRRN2O75325 713 aa25.55■■□□□ 1.68
SIX4-203ENST00000556952 PARNO95453 639 aaKnown RBP25.55■■□□□ 1.68
SIX4-203ENST00000556952 SKIP12755 728 aa25.55■■□□□ 1.68
SIX4-203ENST00000556952 MSNP26038 577 aaKnown RBP25.55■■□□□ 1.68
SIX4-203ENST00000556952 GCNT1Q02742 428 aa25.55■■□□□ 1.68
SIX4-203ENST00000556952 TCTN1Q2MV58 587 aa25.55■■□□□ 1.68
SIX4-203ENST00000556952 KIF12Q96FN5 646 aa25.55■■□□□ 1.68
SIX4-203ENST00000556952 APOL6Q9BWW8 343 aa25.55■■□□□ 1.68
SIX4-203ENST00000556952 UBE2TQ9NPD8 197 aaPredicted RBP25.55■■□□□ 1.68
SIX4-203ENST00000556952 PARP2Q9UGN5 583 aa25.55■■□□□ 1.68
SIX4-203ENST00000556952 PYCARDQ9ULZ3 195 aa25.55■■□□□ 1.68
SIX4-203ENST00000556952 F8VZ95 297 aa25.54■■□□□ 1.68
SIX4-203ENST00000556952 ZNF623O75123 536 aa25.54■■□□□ 1.68
SIX4-203ENST00000556952 CXCL10P02778 98 aa25.54■■□□□ 1.68
SIX4-203ENST00000556952 AKAP5P24588 427 aa25.54■■□□□ 1.68
SIX4-203ENST00000556952 STAT1P42224 750 aa25.54■■□□□ 1.68
SIX4-203ENST00000556952 MFAP3P55082 362 aa25.54■■□□□ 1.68
SIX4-203ENST00000556952 TRPC3Q13507 836 aa25.54■■□□□ 1.68
SIX4-203ENST00000556952 RPUSD2Q8IZ73 545 aaKnown RBP25.54■■□□□ 1.68
SIX4-203ENST00000556952 TDHQ8IZJ6 230 aa25.54■■□□□ 1.68
SIX4-203ENST00000556952 PPM1KQ8N3J5 372 aa25.54■■□□□ 1.68
SIX4-203ENST00000556952 HELQQ8TDG4 1101 aa25.54■■□□□ 1.68
SIX4-203ENST00000556952 FTHL17Q9BXU8 183 aa25.54■■□□□ 1.68
SIX4-203ENST00000556952 ITGA11Q9UKX5 1188 aa25.54■■□□□ 1.68
SIX4-203ENST00000556952 PTPRSQ13332 1948 aa25.54■■□□□ 1.68
SIX4-203ENST00000556952 MICAL3Q7RTP6 2002 aa25.54■■□□□ 1.68
SIX4-203ENST00000556952 MGEA5O60502 916 aa25.53■■□□□ 1.68
SIX4-203ENST00000556952 ASS1P00966 412 aaKnown RBP25.53■■□□□ 1.68
SIX4-203ENST00000556952 KCNE1P15382 129 aa25.53■■□□□ 1.68
SIX4-203ENST00000556952 DRAP1Q14919 205 aaPredicted RBP25.53■■□□□ 1.68
SIX4-203ENST00000556952 E4F1Q66K89 784 aaPredicted RBP25.53■■□□□ 1.68
SIX4-203ENST00000556952 PSRC1Q6PGN9 363 aaPredicted RBP25.53■■□□□ 1.68
SIX4-203ENST00000556952 MRPL10Q7Z7H8 261 aaKnown RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms