RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 ABI2Q9NYB9 513 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-236ENST00000556220 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.78□□□□□ -1.16
ATXN3-236ENST00000556220 GMEB2Q9UKD1 530 aa7.78□□□□□ -1.16
ATXN3-236ENST00000556220 F5P12259 2224 aa7.78□□□□□ -1.16
ATXN3-236ENST00000556220 CLUHO75153 1309 aa7.78□□□□□ -1.16
ATXN3-236ENST00000556220 NFASCO94856 1347 aa7.78□□□□□ -1.16
ATXN3-236ENST00000556220 SMG1Q96Q15 3661 aaKnown RBP7.77□□□□□ -1.16
ATXN3-236ENST00000556220 COL1A2P08123 1366 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 FAM170BA6NMN3 283 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 ZBTB39O15060 712 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 ZC3H11AO75152 810 aaKnown RBP eCLIP7.77□□□□□ -1.17
ATXN3-236ENST00000556220 VTNP04004 478 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 PMLP29590 882 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 CDC27P30260 824 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 MAGEA9P43362 315 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 GPC5P78333 572 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 IRX6P78412 446 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-236ENST00000556220 SHC2P98077 582 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 TROAPQ12815 778 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 SNW1Q13573 536 aaKnown RBP7.77□□□□□ -1.17
ATXN3-236ENST00000556220 HTR4Q13639 388 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 C20orf194Q5TEA3 1177 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 CEP135Q66GS9 1140 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 METTL13Q8N6R0 699 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 BCL7CQ8WUZ0 217 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-236ENST00000556220 SDF4Q9BRK5 362 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 VN1R3Q9BXE9 311 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 ZMYND15Q9H091 742 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 ADAMTS10Q9H324 1103 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 NRDE2Q9H7Z3 1164 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 PSTPIP2Q9H939 334 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 MAN1C1Q9NR34 630 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 KCNH7Q9NS40 1196 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 STK39Q9UEW8 545 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 DPP7Q9UHL4 492 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 MTF2Q9Y483 593 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-236ENST00000556220 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.77□□□□□ -1.17
ATXN3-236ENST00000556220 MYH6P13533 1939 aa7.77□□□□□ -1.17
ATXN3-236ENST00000556220 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-236ENST00000556220 LINC01387J3KSC0 135 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 INPPL1O15357 1258 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 LRP3O75074 770 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 PAPLNO95428 1278 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 C22orf31O95567 290 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 RPLP1P05386 114 aaKnown RBP7.76□□□□□ -1.17
ATXN3-236ENST00000556220 PROS1P07225 676 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 RETP07949 1114 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 FSTP19883 344 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 EIF4BP23588 611 aaKnown RBP7.76□□□□□ -1.17
ATXN3-236ENST00000556220 CD68P34810 354 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-236ENST00000556220 PDE1AP54750 535 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 NLRP11P59045 1033 aaKnown RBP7.76□□□□□ -1.17
ATXN3-236ENST00000556220 ATP11AP98196 1134 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 PRKCQQ04759 706 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 MLF2Q15773 248 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-236ENST00000556220 IMMTQ16891 758 aaKnown RBP7.76□□□□□ -1.17
ATXN3-236ENST00000556220 SLC44A4Q53GD3 710 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 FAM160B1Q5W0V3 765 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 ABHD15Q6UXT9 468 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 RSPO2Q6UXX9 243 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-236ENST00000556220 CYB5R4Q7L1T6 521 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.76□□□□□ -1.17
ATXN3-236ENST00000556220 GALNT11Q8NCW6 608 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 DDX1Q92499 740 aaKnown RBP7.76□□□□□ -1.17
ATXN3-236ENST00000556220 SMG7Q92540 1137 aaKnown RBP7.76□□□□□ -1.17
ATXN3-236ENST00000556220 CLDN23Q96B33 292 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 MXRA8Q9BRK3 442 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 RPP25Q9BUL9 199 aaKnown RBP7.76□□□□□ -1.17
ATXN3-236ENST00000556220 FAM126AQ9BYI3 521 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-236ENST00000556220 MRPL17Q9NRX2 175 aaKnown RBP7.76□□□□□ -1.17
ATXN3-236ENST00000556220 DACT1Q9NYF0 836 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 PCDHA6Q9UN73 950 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 PCDHA8Q9Y5H6 950 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 NUMBLQ9Y6R0 609 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 FRYQ5TBA9 3013 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 SDK1Q7Z5N4 2213 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 DOCK5Q9H7D0 1870 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 ZZEF1O43149 2961 aa7.76□□□□□ -1.17
ATXN3-236ENST00000556220 MAGEB2O15479 319 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 RFPL2O75678 378 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 SSBP05455 408 aaKnown RBP eCLIP7.75□□□□□ -1.17
ATXN3-236ENST00000556220 DARSP14868 501 aaKnown RBP7.75□□□□□ -1.17
ATXN3-236ENST00000556220 GLB1P16278 677 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 SDSP20132 328 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 SLC11A1P49279 550 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 ITGB3BPQ13352 177 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-236ENST00000556220 UBXN2BQ14CS0 331 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 NOMO2Q5JPE7 1267 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 ZBTB41Q5SVQ8 909 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 N4BP2L1Q5TBK1 243 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-236ENST00000556220 TSSK4Q6SA08 328 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 CCDC60Q8IWA6 550 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-236ENST00000556220 CELF5Q8N6W0 485 aaKnown RBP7.75□□□□□ -1.17
ATXN3-236ENST00000556220 CEP120Q8N960 986 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 ST13P5Q8NFI4 369 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-236ENST00000556220 HDAC7Q8WUI4 952 aa7.75□□□□□ -1.17
ATXN3-236ENST00000556220 ZNF707Q96C28 371 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-236ENST00000556220 RRP36Q96EU6 259 aaKnown RBP7.75□□□□□ -1.17
ATXN3-236ENST00000556220 CCDC97Q96F63 343 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-236ENST00000556220 DSCC1Q9BVC3 393 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms