RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ZBTB45Q96K62 511 aaPredicted RBP11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 B3GALT6Q96L58 329 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 TSPAN18Q96SJ8 248 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 FIZ1Q96SL8 496 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 KCNH6Q9H252 994 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 ST6GALNAC4Q9H4F1 302 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 PLEKHA5Q9HAU0 1116 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 ZDHHC7Q9NXF8 308 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 SEL1LQ9UBV2 794 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 CDH22Q9UJ99 828 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 GTF3C3Q9Y5Q9 886 aa11.37□□□□□ -0.59
PTCD2P1-201ENST00000554393 HNRNPDLO14979 420 aaKnown RBP11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 TGM5O43548 720 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 CLTAP09496 248 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 RPL9P32969 192 aaKnown RBP11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 LIG4P49917 911 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 CLCNKBP51801 687 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 ZXDAP98168 799 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 GTF2BQ00403 316 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 CEBPZQ03701 1054 aaKnown RBP11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 PSMD5Q16401 504 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 PTPN21Q16825 1174 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 SLC10A6Q3KNW5 377 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 SPECC1Q5M775 1068 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 CCDC149Q6ZUS6 474 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 MAP4K3Q8IVH8 894 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 TDRD5Q8NAT2 981 aaKnown RBP11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 LINC00301Q8NCQ3 95 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 LNX1Q8TBB1 728 aaPredicted RBP11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 HVCN1Q96D96 273 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 BICD1Q96G01 975 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 ZNF396Q96N95 335 aaPredicted RBP11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 ZMAT2Q96NC0 199 aaKnown RBP11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 CLIC6Q96NY7 704 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 ZDBF2Q9HCK1 2354 aa11.36□□□□□ -0.59
PTCD2P1-201ENST00000554393 CCDC195A0A1B0GUA6 201 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 TTC26A0AVF1 554 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 C2CD4DB7Z1M9 353 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 OGTO15294 1046 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 MEFVO15553 781 aaPredicted RBP11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 FAM189A1O60320 539 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 PPP6R2O75170 966 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 YEATS4O95619 227 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 HSP90AA1P07900 732 aaKnown RBP11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 WEE2P0C1S8 567 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 HARSP12081 509 aaKnown RBP11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 GAP43P17677 238 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 HOXA9P31269 272 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 STAT6P42226 847 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 SOX4Q06945 474 aaPredicted RBP11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 STK38Q15208 465 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 KANK3Q6NY19 840 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 PRSS55Q6UWB4 352 aaPredicted RBP11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 CD300LGQ6UXG3 332 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 TRIM67Q6ZTA4 783 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 ANKS3Q6ZW76 656 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 SV2BQ7L1I2 683 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 RTL10Q7L3V2 364 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 OTOP3Q7RTS5 596 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 BMP8AQ7Z5Y6 402 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 CEP57Q86XR8 500 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 KREMEN2Q8NCW0 462 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 C3orf58Q8NDZ4 430 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 DDX12PQ92771 950 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 ACSF2Q96CM8 615 aaPredicted RBP11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 CLSTN3Q9BQT9 956 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 HAPLN2Q9GZV7 340 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 ZHX3Q9H4I2 956 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 GOLGA2P5Q9HBQ8 144 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 MTRRQ9UBK8 725 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 FBXW11Q9UKB1 542 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 BACE2Q9Y5Z0 518 aa11.35□□□□□ -0.59
PTCD2P1-201ENST00000554393 A0A0B4J269 797 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 MYMKA6NI61 221 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 PODXLO00592 558 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 SYN3O14994 580 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 SPTLC2O15270 562 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 XPOTO43592 962 aaKnown RBP11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 ZMYND10O75800 440 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 ADRB2P07550 413 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 POU2F2P09086 479 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 HNRNPA1P09651 372 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 ZSCAN22P10073 491 aaPredicted RBP11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 CXCL8P10145 99 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 RPL17P18621 184 aaKnown RBP11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 CYP3A5P20815 502 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 MATR3P43243 847 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 POU5F1Q01860 360 aaKnown RBP11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 PPP2R3AQ06190 1150 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 SIGLEC14Q08ET2 396 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 RAB33AQ14088 237 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 ATL3Q6DD88 541 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 PALB2Q86YC2 1186 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 CD302Q8IX05 232 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 UBALD2Q8IYN6 164 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 STAMQ92783 540 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 ZNF707Q96C28 371 aaPredicted RBP11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 DNAJC19Q96DA6 116 aa11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 WDR6Q9NNW5 1121 aaKnown RBP11.34□□□□□ -0.59
PTCD2P1-201ENST00000554393 OLFML3Q9NRN5 406 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms