RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 WDR66Q8TBY9 1149 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 MICAL1Q8TDZ2 1067 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 GNRHR2Q96P88 292 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 CDX2Q99626 313 aaPredicted RBP3.9□□□□□ -1.79
SLIRP-202ENST00000553981 OSBPL5Q9H0X9 879 aaPredicted RBP3.9□□□□□ -1.79
SLIRP-202ENST00000553981 SEC61A2Q9H9S3 476 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 SLC6A20Q9NP91 592 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 PPARGC1AQ9UBK2 798 aaKnown RBP3.9□□□□□ -1.79
SLIRP-202ENST00000553981 ING1Q9UK53 422 aaPredicted RBP3.9□□□□□ -1.79
SLIRP-202ENST00000553981 NR2E3Q9Y5X4 410 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 LRRFIP2Q9Y608 721 aaKnown RBP3.9□□□□□ -1.79
SLIRP-202ENST00000553981 SMCHD1A6NHR9 2005 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 CDH23Q9H251 3354 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 A0A1B0GUL7 405 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 A0A1W2PRG0 241 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 FOXS1O43638 330 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 MSCO60682 206 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 CIAO1O76071 339 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 KNG1P01042 644 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 IFIT1P09914 478 aaKnown RBP3.89□□□□□ -1.79
SLIRP-202ENST00000553981 PTGS1P23219 599 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 HOXA7P31268 230 aaPredicted RBP3.89□□□□□ -1.79
SLIRP-202ENST00000553981 CSF2RBP32927 897 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 CYP2C19P33261 490 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 HERVK_113P62684 666 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 SLFN5Q08AF3 891 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 MAP4K2Q12851 820 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 ARHGEF6Q15052 776 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 TNNI3KQ59H18 835 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 CRB2Q5IJ48 1285 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 GJC2Q5T442 439 aaPredicted RBP3.89□□□□□ -1.79
SLIRP-202ENST00000553981 TCTN3Q6NUS6 607 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 GPR155Q7Z3F1 870 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 GPR142Q7Z601 462 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 RBM12BQ8IXT5 1001 aaKnown RBP3.89□□□□□ -1.79
SLIRP-202ENST00000553981 ACER1Q8TDN7 264 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 MRRFQ96E11 262 aaKnown RBP3.89□□□□□ -1.79
SLIRP-202ENST00000553981 AJUBAQ96IF1 538 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.89□□□□□ -1.79
SLIRP-202ENST00000553981 PIH1D3Q9NQM4 214 aaKnown RBP3.89□□□□□ -1.79
SLIRP-202ENST00000553981 TMOD2Q9NZR1 351 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 ABCF2Q9UG63 623 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 DENND2AQ9ULE3 1009 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 NOB1Q9ULX3 412 aaKnown RBP3.89□□□□□ -1.79
SLIRP-202ENST00000553981 SLC4A7Q9Y6M7 1214 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 CEP290O15078 2479 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 MAST3O60307 1309 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 EYSQ5T1H1 3165 aa3.89□□□□□ -1.79
SLIRP-202ENST00000553981 PARP14Q460N5 1801 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 ZNFX1Q9P2E3 1918 aaKnown RBP3.88□□□□□ -1.79
SLIRP-202ENST00000553981 A0A0G2JMZ2 1700 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 GRXCR1A8MXD5 290 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 ADCY6O43306 1168 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 FBXO21O94952 628 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 LTFP02788 710 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 CKMP06732 381 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 CYBAP13498 195 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 FAHP16930 419 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 BACE1P56817 501 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 PPP2R2AP63151 447 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 SKIDA1Q1XH10 827 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 PAN2Q504Q3 1202 aaKnown RBP3.88□□□□□ -1.79
SLIRP-202ENST00000553981 SLC39A5Q6ZMH5 540 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 C16orf59Q7L2K0 433 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 OTOP3Q7RTS5 596 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 MAPKAPK5Q8IW41 473 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 HOMEZQ8IX15 550 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 FAM9BQ8IZU0 186 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 SMCR8Q8TEV9 937 aaPredicted RBP3.88□□□□□ -1.79
SLIRP-202ENST00000553981 TGFBRAP1Q8WUH2 860 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 KCTD13Q8WZ19 329 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 BADQ92934 168 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 COA7Q96BR5 231 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 LRRC37BQ96QE4 947 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 LMF1Q96S06 567 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 PAGR1Q9BTK6 254 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 SENP6Q9GZR1 1112 aaPredicted RBP3.88□□□□□ -1.79
SLIRP-202ENST00000553981 GPR27Q9NS67 375 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 KCND1Q9NSA2 647 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 AATFQ9NY61 560 aaKnown RBP eCLIP3.88□□□□□ -1.79
SLIRP-202ENST00000553981 SAP30BPQ9UHR5 308 aaKnown RBP3.88□□□□□ -1.79
SLIRP-202ENST00000553981 ZFP69BQ9UJL9 534 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 FLT1P17948 1338 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 VCANP13611 3396 aa3.88□□□□□ -1.79
SLIRP-202ENST00000553981 MYH1P12882 1939 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 COL11A1P12107 1806 aaPredicted RBP3.87□□□□□ -1.79
SLIRP-202ENST00000553981 A0A1W2PQU0 124 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 MYADML2A6NDP7 307 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 GJB6O95452 261 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 SSBP05455 408 aaKnown RBP eCLIP3.87□□□□□ -1.79
SLIRP-202ENST00000553981 SHMT1P34896 483 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 ETFBP38117 255 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 IL15P40933 162 aaPredicted RBP3.87□□□□□ -1.79
SLIRP-202ENST00000553981 GLRBP48167 497 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 GCLCP48506 637 aaPredicted RBP3.87□□□□□ -1.79
SLIRP-202ENST00000553981 PLCD1P51178 756 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 TUSC3Q13454 348 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 GRB14Q14449 540 aa3.87□□□□□ -1.79
SLIRP-202ENST00000553981 PRKD1Q15139 912 aaPredicted RBP3.87□□□□□ -1.79
SLIRP-202ENST00000553981 FXNQ16595 210 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms