RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 CNNM4Q6P4Q7 775 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 PDXDC1Q6P996 788 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 PRSS55Q6UWB4 352 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 TMC5Q6UXY8 1006 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 PALB2Q86YC2 1186 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 GLYCTKQ8IVS8 523 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 POMGNT1Q8WZA1 660 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 KIF12Q96FN5 646 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 TSPAN18Q96SJ8 248 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 C7orf25Q9BPX7 421 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 SCAND2PQ9GZW5 306 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 IKZF4Q9H2S9 585 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 SFXN1Q9H9B4 322 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 AGO2Q9UKV8 859 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 TGM5O43548 720 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 CMA1P23946 247 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 BRCC3P46736 316 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 ASIC1P78348 528 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 PSMD5Q16401 504 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 ATAT1Q5SQI0 421 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 ELMSAN1Q6PJG2 1045 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 CD302Q8IX05 232 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 SYCP3Q8IZU3 236 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 KHSRPQ92945 711 aaKnown RBP eCLIP11.11□□□□□ -0.632e-7■■■□□ 17.4
HNRNPC-208ENST00000553753 FAM212AQ96EL1 285 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 RPGRIP1Q96KN7 1286 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 RIPOR3Q96MK2 946 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 NECTIN4Q96NY8 510 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 CLSTN3Q9BQT9 956 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 FGFBP2Q9BYJ0 223 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 PLEKHA4Q9H4M7 779 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 TMEM206Q9H813 350 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 MAN1C1Q9NR34 630 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 TUBGCP4Q9UGJ1 667 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 CDH22Q9UJ99 828 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 UBQLN1Q9UMX0 589 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 NUB1Q9Y5A7 615 aa11.11□□□□□ -0.63
HNRNPC-208ENST00000553753 A0A1B0GVL5 298 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 LOC730098B7Z3J9 87 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 I3L4J1 428 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 XPOTO43592 962 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 WEE2P0C1S8 567 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 SLFN14P0C7P3 912 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 SPATA31D3P0C874 917 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 CYP3A5P20815 502 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 MTHFRP42898 656 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 POU5F1Q01860 360 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 LILRA6Q6PI73 481 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 C15orf39Q6ZRI6 1047 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 SPATA31D4Q6ZUB0 917 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 ANKS3Q6ZW76 656 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 STXBP4Q6ZWJ1 553 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 CEP57L1Q8IYX8 460 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 HDAC7Q8WUI4 952 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 HPS3Q969F9 1004 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 ASB7Q9H672 318 aa11.1□□□□□ -0.63
HNRNPC-208ENST00000553753 VWA8A3KMH1 1905 aa11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 TCHHQ07283 1943 aa11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 PDCD11Q14690 1871 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 PI4K2BG5E9Z4 385 aa11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 PRPF6O94906 941 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 PFKFB1P16118 471 aa11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 TKTP29401 623 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 CASP1P29466 404 aa11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 LRPAP1P30533 357 aa11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 AFMP43652 599 aa11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 JADE1Q6IE81 842 aa11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 CRELD2Q6UXH1 353 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 UNC13DQ70J99 1090 aa11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 GPR149Q86SP6 731 aa11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 GLIS3Q8NEA6 775 aa11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 BLZF1Q9H2G9 400 aa11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 POMKQ9H5K3 350 aa11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 EPHX3Q9H6B9 360 aa11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 SERTAD1Q9UHV2 236 aa11.09□□□□□ -0.63
HNRNPC-208ENST00000553753 CCDC195A0A1B0GUA6 201 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 PVALEFA0A1B0GWK0 134 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 SYN3O14994 580 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 RFPL2O75678 378 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 LDHAP00338 332 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 ALADP13716 330 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 GARTP22102 1010 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 MCM4P33991 863 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 OR1D2P34982 312 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 NUCB2P80303 420 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 CUL4BQ13620 913 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 FAM26FQ5R3K3 315 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 SPATA1Q5VX52 437 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 RNF135Q8IUD6 432 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 KREMEN2Q8NCW0 462 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 BEST2Q8NFU1 509 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 CMASQ8NFW8 434 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 FEZF2Q8TBJ5 459 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 SUSD3Q96L08 255 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 FAM213AQ9BRX8 229 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 TSHZ2Q9NRE2 1034 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 MTRRQ9UBK8 725 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms