RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 ZACNQ401N2 412 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 NOMO2Q5JPE7 1267 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 GBP6Q6ZN66 633 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 C15orf39Q6ZRI6 1047 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 NT5DC4Q86YG4 428 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 ABI1Q8IZP0 508 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 C1orf127Q8N9H9 656 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 GSTCDQ8NEC7 633 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 BEST2Q8NFU1 509 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 URGCPQ8TCY9 931 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 TAS1R2Q8TE23 839 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 ELMO3Q96BJ8 720 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 PPP1R10Q96QC0 940 aaKnown RBP11.11□□□□□ -0.63
RAB5C-207ENST00000550504 LSM14BQ9BX40 385 aaKnown RBP11.11□□□□□ -0.63
RAB5C-207ENST00000550504 GOLGA2P5Q9HBQ8 144 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 DPP3Q9NY33 737 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 CACNG4Q9UBN1 327 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 UBQLN1Q9UMX0 589 aaKnown RBP11.11□□□□□ -0.63
RAB5C-207ENST00000550504 DERAQ9Y315 318 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 C2CD2Q9Y426 696 aa11.11□□□□□ -0.63
RAB5C-207ENST00000550504 TTC3P53804 2025 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 TBKBP1A7MCY6 615 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 P4HA2O15460 535 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 XPOTO43592 962 aaKnown RBP11.1□□□□□ -0.63
RAB5C-207ENST00000550504 LRRN2O75325 713 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 VNN1O95497 513 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 CST3P01034 146 aaPredicted RBP11.1□□□□□ -0.63
RAB5C-207ENST00000550504 HLA-DRAP01903 254 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 SLC9A1P19634 815 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 POLR2BP30876 1174 aaKnown RBP11.1□□□□□ -0.63
RAB5C-207ENST00000550504 MAGEA10P43363 369 aaPredicted RBP11.1□□□□□ -0.63
RAB5C-207ENST00000550504 MYL6P60660 151 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 APBA1Q02410 837 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 RNASELQ05823 741 aaKnown RBP11.1□□□□□ -0.63
RAB5C-207ENST00000550504 KCNMA1Q12791 1236 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 CETN1Q12798 172 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 LRMPQ12912 555 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 TRPC3Q13507 836 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 NCOA4Q13772 614 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 ZBTB6Q15916 424 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 EXOC3L4Q17RC7 722 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 PAN2Q504Q3 1202 aaKnown RBP11.1□□□□□ -0.63
RAB5C-207ENST00000550504 EPC2Q52LR7 807 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 DRC7Q8IY82 874 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 CRIPAKQ8N1N5 446 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 FBXL13Q8NEE6 735 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 ANP32BQ92688 251 aaKnown RBP11.1□□□□□ -0.63
RAB5C-207ENST00000550504 RABGGTAQ92696 567 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 SEMA4DQ92854 862 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 TOP1MTQ969P6 601 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 MRFAP1L1Q96HT8 127 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 CASD1Q96PB1 797 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 PI4K2AQ9BTU6 479 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 INTS2Q9H0H0 1204 aaKnown RBP11.1□□□□□ -0.63
RAB5C-207ENST00000550504 SLC38A7Q9NVC3 462 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 RNF216Q9NWF9 866 aaPredicted RBP11.1□□□□□ -0.63
RAB5C-207ENST00000550504 CXXC1Q9P0U4 656 aaPredicted RBP11.1□□□□□ -0.63
RAB5C-207ENST00000550504 SIX4Q9UIU6 781 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 AGAP1Q9UPQ3 857 aa11.1□□□□□ -0.63
RAB5C-207ENST00000550504 PDCD11Q14690 1871 aaKnown RBP11.1□□□□□ -0.63
RAB5C-207ENST00000550504 GTPBP10A4D1E9 387 aaKnown RBP11.09□□□□□ -0.63
RAB5C-207ENST00000550504 CASTOR2A6NHX0 329 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 PPEF2O14830 753 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 PMM2O15305 246 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 INPPL1O15357 1258 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 HOXA2O43364 376 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 PON1P27169 355 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 PBX1P40424 430 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 GRIK3Q13003 919 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 NAB2Q15742 525 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 TMC6Q7Z403 805 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 ZNF280BQ86YH2 543 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 VSTM4Q8IW00 320 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 EHBP1Q8NDI1 1231 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 HERVK_113Q902F9 699 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 ERGIC2Q96RQ1 377 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 TSPAN18Q96SJ8 248 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 FAM207AQ9NSI2 230 aaPredicted RBP11.09□□□□□ -0.63
RAB5C-207ENST00000550504 TBC1D13Q9NVG8 400 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 RAB20Q9NX57 234 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 HCSTQ9UBK5 93 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 ITGA11Q9UKX5 1188 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 SIK3Q9Y2K2 1263 aa11.09□□□□□ -0.63
RAB5C-207ENST00000550504 R3HCC1Q9Y3T6 440 aaKnown RBP11.09□□□□□ -0.63
RAB5C-207ENST00000550504 TDRD15B5MCY1 1934 aaKnown RBP11.08□□□□□ -0.64
RAB5C-207ENST00000550504 A0A1W2PQC6 194 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 B4GALT3O60512 393 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 DGKIO75912 1065 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 DDHD2O94830 711 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 CYP3A5P20815 502 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 RBP5P82980 135 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 TUSC3Q13454 348 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 ZNF699Q32M78 642 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 WDR44Q5JSH3 913 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 C9orf57Q5W0N0 161 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 SPOPLQ6IQ16 392 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 GJB7Q6PEY0 223 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 TRIM65Q6PJ69 517 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 SPC24Q8NBT2 197 aa11.08□□□□□ -0.64
RAB5C-207ENST00000550504 NEK11Q8NG66 645 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms