RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 PHF7Q9BWX1 381 aaPredicted RBP18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 MAN1C1Q9NR34 630 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 TUBGCP4Q9UGJ1 667 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 AGO2Q9UKV8 859 aaKnown RBP18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 KCNH3Q9ULD8 1083 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 STYXL1Q9Y6J8 313 aa18.76■□□□□ 0.59
CHMP1A-208ENST00000550102 C1RP00736 705 aa18.75■□□□□ 0.59
CHMP1A-208ENST00000550102 RPL17P18621 184 aaKnown RBP18.75■□□□□ 0.59
CHMP1A-208ENST00000550102 FGFR3P22607 806 aa18.75■□□□□ 0.59
CHMP1A-208ENST00000550102 MTHFRP42898 656 aa18.75■□□□□ 0.59
CHMP1A-208ENST00000550102 POSTNQ15063 836 aa18.75■□□□□ 0.59
CHMP1A-208ENST00000550102 CEP57L1Q8IYX8 460 aa18.75■□□□□ 0.59
CHMP1A-208ENST00000550102 SYCP3Q8IZU3 236 aa18.75■□□□□ 0.59
CHMP1A-208ENST00000550102 CHAMP1Q96JM3 812 aa18.75■□□□□ 0.59
CHMP1A-208ENST00000550102 FGFBP2Q9BYJ0 223 aa18.75■□□□□ 0.59
CHMP1A-208ENST00000550102 SCAND2PQ9GZW5 306 aaPredicted RBP18.75■□□□□ 0.59
CHMP1A-208ENST00000550102 IKZF4Q9H2S9 585 aa18.75■□□□□ 0.59
CHMP1A-208ENST00000550102 CPSF3Q9UKF6 684 aaKnown RBP18.75■□□□□ 0.59
CHMP1A-208ENST00000550102 UBQLN1Q9UMX0 589 aaKnown RBP18.75■□□□□ 0.59
CHMP1A-208ENST00000550102 NUB1Q9Y5A7 615 aa18.75■□□□□ 0.59
CHMP1A-208ENST00000550102 LACTBL1A8MY62 500 aa18.74■□□□□ 0.59
CHMP1A-208ENST00000550102 KCNA1Q09470 495 aa18.74■□□□□ 0.59
CHMP1A-208ENST00000550102 CD300LGQ6UXG3 332 aa18.74■□□□□ 0.59
CHMP1A-208ENST00000550102 GLYCTKQ8IVS8 523 aa18.74■□□□□ 0.59
CHMP1A-208ENST00000550102 CD302Q8IX05 232 aa18.74■□□□□ 0.59
CHMP1A-208ENST00000550102 C12orf76Q8N812 135 aaPredicted RBP18.74■□□□□ 0.59
CHMP1A-208ENST00000550102 C7orf25Q9BPX7 421 aa18.74■□□□□ 0.59
CHMP1A-208ENST00000550102 I3L4J1 428 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 ADRB2P07550 413 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 PFKFB1P16118 471 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 CMA1P23946 247 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 IGFBP6P24592 240 aaPredicted RBP18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 TKTP29401 623 aaKnown RBP18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 BRCC3P46736 316 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 ACOT2P49753 483 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 SPAG1Q07617 926 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 FAM26FQ5R3K3 315 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 TMC5Q6UXY8 1006 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 ANKS3Q6ZW76 656 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 PALB2Q86YC2 1186 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 LNX1Q8TBB1 728 aaPredicted RBP18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 HDAC7Q8WUI4 952 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 FAM212AQ96EL1 285 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 PLEKHA4Q9H4M7 779 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 TMEM206Q9H813 350 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 CDH22Q9UJ99 828 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 SCN1AP35498 2009 aa18.73■□□□□ 0.59
CHMP1A-208ENST00000550102 LOC730098B7Z3J9 87 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 EIF3DO15371 548 aaKnown RBP eCLIP18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 TGM5O43548 720 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 ACTN4O43707 911 aaKnown RBP18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 SLFN14P0C7P3 912 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 CYP3A5P20815 502 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 GARTP22102 1010 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 ADSSP30520 456 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 LRPAP1P30533 357 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 MCM4P33991 863 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 POU5F1Q01860 360 aaKnown RBP18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 TMEM132DQ14C87 1099 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 ZBTB6Q15916 424 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 JADE1Q6IE81 842 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 C15orf39Q6ZRI6 1047 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 UNC13DQ70J99 1090 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 CMASQ8NFW8 434 aaPredicted RBP18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 HPS3Q969F9 1004 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 RPGRIP1Q96KN7 1286 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 POMKQ9H5K3 350 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 MTRRQ9UBK8 725 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 USP25Q9UHP3 1055 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 DERAQ9Y315 318 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 TRIOO75962 3097 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 UBE4BO95155 1302 aa18.72■□□□□ 0.59
CHMP1A-208ENST00000550102 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 A0A1B0GVL5 298 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 SYN3O14994 580 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 PRPF6O94906 941 aaKnown RBP18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 IL18RAPO95256 599 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 NFICP08651 508 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 WEE2P0C1S8 567 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 AFMP43652 599 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 NUCB2P80303 420 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 ATAT1Q5SQI0 421 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 KANK3Q6NY19 840 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 GPR149Q86SP6 731 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 GLIS3Q8NEA6 775 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 BEST2Q8NFU1 509 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 KHSRPQ92945 711 aaKnown RBP eCLIP18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 SUSD3Q96L08 255 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 CLSTN3Q9BQT9 956 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 C1QTNF1Q9BXJ1 281 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 BLZF1Q9H2G9 400 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 ASB7Q9H672 318 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 SERTAD1Q9UHV2 236 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 C2CD2Q9Y426 696 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 NR2E1Q9Y466 385 aa18.71■□□□□ 0.59
CHMP1A-208ENST00000550102 SPATA31D3P0C874 917 aa18.7■□□□□ 0.58
CHMP1A-208ENST00000550102 CASP1P29466 404 aa18.7■□□□□ 0.58
CHMP1A-208ENST00000550102 LIN9Q5TKA1 542 aa18.7■□□□□ 0.58
CHMP1A-208ENST00000550102 SPATA1Q5VX52 437 aa18.7■□□□□ 0.58
CHMP1A-208ENST00000550102 ARMCX5Q6P1M9 558 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms