RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-208ENST00000549205 TRIM21P19474 475 aaKnown RBP13.19□□□□□ -0.3
ERBB3-208ENST00000549205 PPFIBP1Q86W92 1011 aa13.19□□□□□ -0.3
ERBB3-208ENST00000549205 C1orf127Q8N9H9 656 aa13.19□□□□□ -0.3
ERBB3-208ENST00000549205 GSTCDQ8NEC7 633 aa13.19□□□□□ -0.3
ERBB3-208ENST00000549205 BEST2Q8NFU1 509 aa13.19□□□□□ -0.3
ERBB3-208ENST00000549205 CXorf38Q8TB03 319 aa13.19□□□□□ -0.3
ERBB3-208ENST00000549205 PPP1R10Q96QC0 940 aaKnown RBP13.19□□□□□ -0.3
ERBB3-208ENST00000549205 RPS6KC1Q96S38 1066 aa13.19□□□□□ -0.3
ERBB3-208ENST00000549205 TTYH3Q9C0H2 523 aa13.19□□□□□ -0.3
ERBB3-208ENST00000549205 GANQ9H2C0 597 aa13.19□□□□□ -0.3
ERBB3-208ENST00000549205 SIX2Q9NPC8 291 aa13.19□□□□□ -0.3
ERBB3-208ENST00000549205 RNF216Q9NWF9 866 aaPredicted RBP13.19□□□□□ -0.3
ERBB3-208ENST00000549205 DPP3Q9NY33 737 aa13.19□□□□□ -0.3
ERBB3-208ENST00000549205 TUBGCP4Q9UGJ1 667 aa13.19□□□□□ -0.3
ERBB3-208ENST00000549205 SIX4Q9UIU6 781 aa13.19□□□□□ -0.3
ERBB3-208ENST00000549205 ITGA11Q9UKX5 1188 aa13.19□□□□□ -0.3
ERBB3-208ENST00000549205 PLAGL2Q9UPG8 496 aa13.19□□□□□ -0.3
ERBB3-208ENST00000549205 PCDHB7Q9Y5E2 793 aa13.19□□□□□ -0.3
ERBB3-208ENST00000549205 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.19□□□□□ -0.3
ERBB3-208ENST00000549205 A0A1W2PQJ5 194 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 EPHB6O15197 1021 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 EFCAB14O75071 495 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 ZC3H11AO75152 810 aaKnown RBP eCLIP13.18□□□□□ -0.3
ERBB3-208ENST00000549205 OFD1O75665 1012 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 NOL4O94818 638 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 ITGB3P05106 788 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 ACTN1P12814 892 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 CYP3A5P20815 502 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 SCNN1GP51170 649 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 AFF1P51825 1210 aaKnown RBP13.18□□□□□ -0.3
ERBB3-208ENST00000549205 GUCY2FP51841 1108 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 APBA1Q02410 837 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 FPGSQ05932 587 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 PPIGQ13427 754 aaKnown RBP eCLIP13.18□□□□□ -0.31e-8■□□□□ 9.4
ERBB3-208ENST00000549205 TRPC3Q13507 836 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 CLLU1OSQ5K130 101 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 KLHDC7AQ5VTJ3 777 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 GLB1LQ6UWU2 654 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 NPAS4Q8IUM7 802 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 TNS4Q8IZW8 715 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 CRIPAKQ8N1N5 446 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 BADQ92934 168 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 C18orf25Q96B23 403 aaPredicted RBP13.18□□□□□ -0.3
ERBB3-208ENST00000549205 EDEM3Q9BZQ6 932 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 RNF19AQ9NV58 838 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 SLC38A7Q9NVC3 462 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 CEP72Q9P209 647 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 APEX2Q9UBZ4 518 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 FBXL5Q9UKA1 691 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 DAAM1Q9Y4D1 1078 aa13.18□□□□□ -0.3
ERBB3-208ENST00000549205 MYO9BQ13459 2157 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 HOXA2O43364 376 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 LRRN2O75325 713 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 BAIAP3O94812 1187 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 ASS1P00966 412 aaKnown RBP13.17□□□□□ -0.3
ERBB3-208ENST00000549205 CST3P01034 146 aaPredicted RBP13.17□□□□□ -0.3
ERBB3-208ENST00000549205 THP07101 528 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 TPM1P09493 284 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 ACRP10323 421 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 FGFR1P11362 822 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 UCHL3P15374 230 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 RFX1P22670 979 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 MYL6P60660 151 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 SOX4Q06945 474 aaPredicted RBP13.17□□□□□ -0.3
ERBB3-208ENST00000549205 LRMPQ12912 555 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 GRIK3Q13003 919 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 NAB2Q15742 525 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 SGSM1Q2NKQ1 1148 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 WDR44Q5JSH3 913 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 SCARA3Q6AZY7 606 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 TMEM130Q8N3G9 435 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 CCDC150Q8NCX0 1101 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 URGCPQ8TCY9 931 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 HELQQ8TDG4 1101 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 TAF4BQ92750 862 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 NT5C1BQ96P26 610 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 PI4K2AQ9BTU6 479 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 IMPG2Q9BZV3 1241 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 MIOSQ9NXC5 875 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 PCDH10Q9P2E7 1040 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 LRFN2Q9ULH4 789 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 CAPN11Q9UMQ6 739 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 INPP5FQ9Y2H2 1132 aa13.17□□□□□ -0.3
ERBB3-208ENST00000549205 MYH10P35580 1976 aa13.16□□□□□ -0.3
ERBB3-208ENST00000549205 CHD9Q3L8U1 2897 aa13.16□□□□□ -0.3
ERBB3-208ENST00000549205 KIAA1671Q9BY89 1806 aa13.16□□□□□ -0.3
ERBB3-208ENST00000549205 COL4A6Q14031 1691 aa13.16□□□□□ -0.3
ERBB3-208ENST00000549205 ANO9A1A5B4 782 aa13.16□□□□□ -0.3
ERBB3-208ENST00000549205 RNF225M0QZC1 329 aaPredicted RBP13.16□□□□□ -0.3
ERBB3-208ENST00000549205 MFAP3LO75121 409 aa13.16□□□□□ -0.3
ERBB3-208ENST00000549205 POMCP01189 267 aa13.16□□□□□ -0.3
ERBB3-208ENST00000549205 KRT19P08727 400 aa13.16□□□□□ -0.3
ERBB3-208ENST00000549205 POLR2BP30876 1174 aaKnown RBP13.16□□□□□ -0.3
ERBB3-208ENST00000549205 ATICP31939 592 aa13.16□□□□□ -0.3
ERBB3-208ENST00000549205 CASP14P31944 242 aa13.16□□□□□ -0.3
ERBB3-208ENST00000549205 FXR1P51114 621 aaKnown RBP eCLIP13.16□□□□□ -0.3
ERBB3-208ENST00000549205 GSDMDP57764 484 aa13.16□□□□□ -0.3
ERBB3-208ENST00000549205 POLR2FP61218 127 aaKnown RBP13.16□□□□□ -0.3
ERBB3-208ENST00000549205 NOP14P78316 857 aaKnown RBP13.16□□□□□ -0.3
ERBB3-208ENST00000549205 RBP5P82980 135 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms