RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 HOXA9P31269 272 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 SOX9P48436 509 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 JAK3P52333 1124 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 FAM193AP78312 1265 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 SIM1P81133 766 aaPredicted RBP15.53■□□□□ 0.08
PTCH1-217ENST00000548420 CREB5Q02930 508 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 FAM78AQ5JUQ0 283 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 TXNDC11Q6PKC3 985 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 VITQ6UXI7 678 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 MRPL10Q7Z7H8 261 aaKnown RBP15.53■□□□□ 0.08
PTCH1-217ENST00000548420 ZNF843Q8N446 348 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 IRF7Q92985 503 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 C8orf76Q96K31 380 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 CLSTN3Q9BQT9 956 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 RSAD1Q9HA92 442 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.53■□□□□ 0.08
PTCH1-217ENST00000548420 MIOSQ9NXC5 875 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 GDE1Q9NZC3 331 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 GABBR1Q9UBS5 961 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 TCEAL9Q9UHQ7 104 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 PIN4Q9Y237 131 aaKnown RBP15.53■□□□□ 0.08
PTCH1-217ENST00000548420 MRPS23Q9Y3D9 190 aaKnown RBP15.53■□□□□ 0.08
PTCH1-217ENST00000548420 PCDHB2Q9Y5E7 798 aa15.53■□□□□ 0.08
PTCH1-217ENST00000548420 DCLK1O15075 740 aa15.52■□□□□ 0.08
PTCH1-217ENST00000548420 MAGEB2O15479 319 aa15.52■□□□□ 0.08
PTCH1-217ENST00000548420 SKIP12755 728 aa15.52■□□□□ 0.08
PTCH1-217ENST00000548420 DSC1Q08554 894 aa15.52■□□□□ 0.08
PTCH1-217ENST00000548420 PPP2R5CQ13362 524 aa15.52■□□□□ 0.08
PTCH1-217ENST00000548420 RTP2Q5QGT7 225 aa15.52■□□□□ 0.08
PTCH1-217ENST00000548420 RAB44Q7Z6P3 723 aaPredicted RBP15.52■□□□□ 0.08
PTCH1-217ENST00000548420 NLRP7Q8WX94 980 aa15.52■□□□□ 0.08
PTCH1-217ENST00000548420 PIK3R5Q8WYR1 880 aa15.52■□□□□ 0.08
PTCH1-217ENST00000548420 FOXP1Q9H334 677 aaPredicted RBP15.52■□□□□ 0.08
PTCH1-217ENST00000548420 CCDC86Q9H6F5 360 aaKnown RBP15.52■□□□□ 0.08
PTCH1-217ENST00000548420 POLR3BQ9NW08 1133 aaPredicted RBP15.52■□□□□ 0.08
PTCH1-217ENST00000548420 VAV3Q9UKW4 847 aa15.52■□□□□ 0.08
PTCH1-217ENST00000548420 PTPN13Q12923 2485 aa15.51■□□□□ 0.07
PTCH1-217ENST00000548420 WNT7AO00755 349 aa15.51■□□□□ 0.07
PTCH1-217ENST00000548420 XYLBO75191 536 aa15.51■□□□□ 0.07
PTCH1-217ENST00000548420 STBD1O95210 358 aa15.51■□□□□ 0.07
PTCH1-217ENST00000548420 IRX4P78413 519 aa15.51■□□□□ 0.07
PTCH1-217ENST00000548420 GUCY1B3Q02153 619 aa15.51■□□□□ 0.07
PTCH1-217ENST00000548420 LRRC32Q14392 662 aa15.51■□□□□ 0.07
PTCH1-217ENST00000548420 SAFBQ15424 915 aaKnown RBP eCLIP15.51■□□□□ 0.07
PTCH1-217ENST00000548420 FUT10Q6P4F1 479 aa15.51■□□□□ 0.07
PTCH1-217ENST00000548420 PIP4P1Q86T03 277 aa15.51■□□□□ 0.07
PTCH1-217ENST00000548420 GPR65Q8IYL9 337 aa15.51■□□□□ 0.07
PTCH1-217ENST00000548420 SLC7A14Q8TBB6 771 aa15.51■□□□□ 0.07
PTCH1-217ENST00000548420 SCLT1Q96NL6 688 aa15.51■□□□□ 0.07
PTCH1-217ENST00000548420 UBL7Q96S82 380 aaPredicted RBP15.51■□□□□ 0.07
PTCH1-217ENST00000548420 KANSL3Q9P2N6 904 aa15.51■□□□□ 0.07
PTCH1-217ENST00000548420 SAMM50Q9Y512 469 aa15.51■□□□□ 0.07
PTCH1-217ENST00000548420 TEP1Q99973 2627 aaKnown RBP15.51■□□□□ 0.07
PTCH1-217ENST00000548420 A0A087WZ62 844 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 CCDC163A0A0D9SF12 145 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 J3QKU1 62 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 EML1O00423 815 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 MEFVO15553 781 aaPredicted RBP15.5■□□□□ 0.07
PTCH1-217ENST00000548420 AKAP3O75969 853 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 RHOP08100 348 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 POU2F2P09086 479 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 U2AF2P26368 475 aaKnown RBP eCLIP15.5■□□□□ 0.07
PTCH1-217ENST00000548420 RAB27AP51159 221 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 FOSBP53539 338 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 SRSF1Q07955 248 aaKnown RBP eCLIP15.5■□□□□ 0.07
PTCH1-217ENST00000548420 SPIRE1Q08AE8 756 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 UGCGQ16739 394 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 USP41Q3LFD5 358 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 UBXN11Q5T124 520 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 LIN9Q5TKA1 542 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 MIER3Q7Z3K6 550 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 POTEDQ86YR6 584 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 CKAP2LQ8IYA6 745 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 SLFN12Q8IYM2 578 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 PIAS4Q8N2W9 510 aaPredicted RBP15.5■□□□□ 0.07
PTCH1-217ENST00000548420 FAM184AQ8NB25 1140 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 RABGGTAQ92696 567 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 PGBD4Q96DM1 585 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 TCEAL4Q96EI5 215 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 FAM167AQ96KS9 214 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 MTMR9Q96QG7 549 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 FDXACB1Q9BRP7 624 aaPredicted RBP15.5■□□□□ 0.07
PTCH1-217ENST00000548420 ZFP14Q9HCL3 533 aa15.5■□□□□ 0.07
PTCH1-217ENST00000548420 TK2O00142 265 aa15.49■□□□□ 0.07
PTCH1-217ENST00000548420 CHMP2AO43633 222 aa15.49■□□□□ 0.07
PTCH1-217ENST00000548420 OATP04181 439 aa15.49■□□□□ 0.07
PTCH1-217ENST00000548420 TMOD1P28289 359 aa15.49■□□□□ 0.07
PTCH1-217ENST00000548420 VIPR2P41587 438 aa15.49■□□□□ 0.07
PTCH1-217ENST00000548420 CCINQ13939 588 aa15.49■□□□□ 0.07
PTCH1-217ENST00000548420 TARBP2Q15633 366 aaKnown RBP15.49■□□□□ 0.07
PTCH1-217ENST00000548420 ZNF710Q8N1W2 664 aa15.49■□□□□ 0.07
PTCH1-217ENST00000548420 ZSWIM3Q96MP5 696 aa15.49■□□□□ 0.07
PTCH1-217ENST00000548420 CEP89Q96ST8 783 aa15.49■□□□□ 0.07
PTCH1-217ENST00000548420 NIFKQ9BYG3 293 aaKnown RBP15.49■□□□□ 0.07
PTCH1-217ENST00000548420 GCOM2Q9BZD3 368 aaPredicted RBP15.49■□□□□ 0.07
PTCH1-217ENST00000548420 NRBP2Q9NSY0 501 aa15.49■□□□□ 0.07
PTCH1-217ENST00000548420 BAG4O95429 457 aaKnown RBP15.48■□□□□ 0.07
PTCH1-217ENST00000548420 PSMC3P17980 439 aa15.48■□□□□ 0.07
PTCH1-217ENST00000548420 PRKCEQ02156 737 aa15.48■□□□□ 0.07
PTCH1-217ENST00000548420 CUL4AQ13619 759 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms