RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	PHF2	O75151	1096 aa		5.16	□□□□□ -1.58
RPAP3-205	ENST00000548211	SNRPA1	P09661	255 aa	Known RBP	5.16	□□□□□ -1.58
RPAP3-205	ENST00000548211	FPR1	P21462	350 aa		5.16	□□□□□ -1.58
RPAP3-205	ENST00000548211	FDXR	P22570	491 aa		5.16	□□□□□ -1.58
RPAP3-205	ENST00000548211	SREBF1	P36956	1147 aa		5.16	□□□□□ -1.58
RPAP3-205	ENST00000548211	SIM1	P81133	766 aa	Predicted RBP	5.16	□□□□□ -1.58
RPAP3-205	ENST00000548211	STRA8	Q7Z7C7	330 aa		5.16	□□□□□ -1.58
RPAP3-205	ENST00000548211	UBR7	Q8N806	425 aa		5.16	□□□□□ -1.58
RPAP3-205	ENST00000548211	USP7	Q93009	1102 aa		5.16	□□□□□ -1.58
RPAP3-205	ENST00000548211	RNF31	Q96EP0	1072 aa		5.16	□□□□□ -1.58
RPAP3-205	ENST00000548211	MYOC	Q99972	504 aa		5.16	□□□□□ -1.58
RPAP3-205	ENST00000548211	QRSL1	Q9H0R6	528 aa	Known RBP	5.16	□□□□□ -1.58
RPAP3-205	ENST00000548211	USP25	Q9UHP3	1055 aa		5.16	□□□□□ -1.58
RPAP3-205	ENST00000548211	ABCA9	Q8IUA7	1624 aa		5.15	□□□□□ -1.58
RPAP3-205	ENST00000548211	AKNA	Q7Z591	1439 aa		5.15	□□□□□ -1.58
RPAP3-205	ENST00000548211	FER1L4	A9Z1Z3	1794 aa		5.15	□□□□□ -1.58
RPAP3-205	ENST00000548211	ARHGEF40	Q8TER5	1519 aa		5.15	□□□□□ -1.58
RPAP3-205	ENST00000548211	MATN4	O95460	622 aa		5.15	□□□□□ -1.59
RPAP3-205	ENST00000548211	IGLV2-14	P01704	120 aa		5.15	□□□□□ -1.59
RPAP3-205	ENST00000548211	RAP2A	P10114	183 aa		5.15	□□□□□ -1.59
RPAP3-205	ENST00000548211	FGFR4	P22455	802 aa		5.15	□□□□□ -1.59
RPAP3-205	ENST00000548211	BLOC1S1	P78537	153 aa		5.15	□□□□□ -1.59
RPAP3-205	ENST00000548211	HSD11B2	P80365	405 aa		5.15	□□□□□ -1.59
RPAP3-205	ENST00000548211	PPP3CA	Q08209	521 aa		5.15	□□□□□ -1.59
RPAP3-205	ENST00000548211	ZNF169	Q14929	603 aa	Predicted RBP	5.15	□□□□□ -1.59
RPAP3-205	ENST00000548211	ADRM1	Q16186	407 aa		5.15	□□□□□ -1.59
RPAP3-205	ENST00000548211		Q6ZNX1	250 aa		5.15	□□□□□ -1.59
RPAP3-205	ENST00000548211	NAF1	Q96HR8	494 aa	Known RBP	5.15	□□□□□ -1.59
RPAP3-205	ENST00000548211	FUBP3	Q96I24	572 aa	Known RBP eCLIP	5.15	□□□□□ -1.59
RPAP3-205	ENST00000548211	BCO1	Q9HAY6	547 aa		5.15	□□□□□ -1.59
RPAP3-205	ENST00000548211	FBXO34	Q9NWN3	711 aa		5.15	□□□□□ -1.59
RPAP3-205	ENST00000548211	SCOC	Q9UIL1	159 aa		5.15	□□□□□ -1.59
RPAP3-205	ENST00000548211	NOX1	Q9Y5S8	564 aa		5.15	□□□□□ -1.59
RPAP3-205	ENST00000548211	RAPGEF2	Q9Y4G8	1499 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	ABCA8	O94911	1581 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	CFAP74	Q9C0B2	1584 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	C1QL1	O75973	258 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	ECHS1	P30084	290 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	ALDH1A3	P47895	512 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	CXADR	P78310	365 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	MXRA7	P84157	204 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	STRN3	Q13033	797 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	UBXN2B	Q14CS0	331 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	SPDYE7P	Q495Y7	208 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	RRP12	Q5JTH9	1297 aa	Known RBP	5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	ARHGEF25	Q86VW2	580 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	PQLC1	Q8N2U9	271 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	CAGE1	Q8TC20	777 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	HOXB13	Q92826	284 aa	Predicted RBP	5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	RAX2	Q96IS3	184 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	ACAP3	Q96P50	834 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	UHRF1	Q96T88	793 aa	Predicted RBP	5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	SPATA5L1	Q9BVQ7	753 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	IFT22	Q9H7X7	185 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	KIAA1586	Q9HCI6	787 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	SLC23A1	Q9UHI7	598 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	FRMD4B	Q9Y2L6	1034 aa		5.14	□□□□□ -1.59
RPAP3-205	ENST00000548211	EFCAB5	A4FU69	1503 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	TTC37	Q6PGP7	1564 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	CTTNBP2	Q8WZ74	1663 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	LRRC3C	A6NJW4	275 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	GOLGA8A	A7E2F4	631 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	ZFPL1	O95159	310 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	RARRES1	P49788	294 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	ELL	P55199	621 aa	Predicted RBP	5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	PER3	P56645	1201 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	SESN3	P58005	492 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	SP140	Q13342	867 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	DHCR24	Q15392	516 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	UBE3B	Q7Z3V4	1068 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	KCNK18	Q7Z418	384 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	RNF180	Q86T96	592 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	ZNF384	Q8TF68	577 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	LMBR1	Q8WVP7	490 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	FUBP1	Q96AE4	644 aa	Known RBP	5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	PAWR	Q96IZ0	340 aa	Known RBP	5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	DUSP26	Q9BV47	211 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	IFT122	Q9HBG6	1241 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	CASS4	Q9NQ75	786 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	FOXJ2	Q9P0K8	574 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	MAPRE3	Q9UPY8	281 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	PTPRT	O14522	1441 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	DENND4B	O75064	1496 aa	Predicted RBP	5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	MAGI2	Q86UL8	1455 aa		5.13	□□□□□ -1.59
RPAP3-205	ENST00000548211	POMC	P01189	267 aa		5.12	□□□□□ -1.59
RPAP3-205	ENST00000548211	ATP5J	P18859	108 aa		5.12	□□□□□ -1.59
RPAP3-205	ENST00000548211	GCSH	P23434	173 aa		5.12	□□□□□ -1.59
RPAP3-205	ENST00000548211	GUCY1A2	P33402	732 aa		5.12	□□□□□ -1.59
RPAP3-205	ENST00000548211	SCAND1	P57086	179 aa		5.12	□□□□□ -1.59
RPAP3-205	ENST00000548211	MRPS9	P82933	396 aa	Known RBP	5.12	□□□□□ -1.59
RPAP3-205	ENST00000548211	SEPT2	Q15019	361 aa		5.12	□□□□□ -1.59
RPAP3-205	ENST00000548211	CYP2A13	Q16696	494 aa		5.12	□□□□□ -1.59
RPAP3-205	ENST00000548211	MUM1	Q2TAK8	710 aa		5.12	□□□□□ -1.59
RPAP3-205	ENST00000548211	TOR2A	Q5JU69	321 aa		5.12	□□□□□ -1.59
RPAP3-205	ENST00000548211	ARMC6	Q6NXE6	501 aa		5.12	□□□□□ -1.59
RPAP3-205	ENST00000548211	ZNF529	Q6P280	563 aa		5.12	□□□□□ -1.59
RPAP3-205	ENST00000548211	DRC7	Q8IY82	874 aa		5.12	□□□□□ -1.59
RPAP3-205	ENST00000548211	AUTS2	Q8WXX7	1259 aa		5.12	□□□□□ -1.59
RPAP3-205	ENST00000548211	TTC1	Q99614	292 aa		5.12	□□□□□ -1.59
RPAP3-205	ENST00000548211	RNPEP	Q9H4A4	650 aa		5.12	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms