RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 ASTE1Q2TB18 679 aaPredicted RBP13.31□□□□□ -0.28
RAB5B-204ENST00000548068 SLC10A6Q3KNW5 377 aa13.31□□□□□ -0.28
RAB5B-204ENST00000548068 TWF2Q6IBS0 349 aaKnown RBP13.31□□□□□ -0.28
RAB5B-204ENST00000548068 JADE1Q6IE81 842 aa13.31□□□□□ -0.28
RAB5B-204ENST00000548068 FAM43BQ6ZT52 329 aaPredicted RBP13.31□□□□□ -0.28
RAB5B-204ENST00000548068 EFCAB13Q8IY85 973 aa13.31□□□□□ -0.28
RAB5B-204ENST00000548068 TMEM192Q8IY95 271 aa13.31□□□□□ -0.28
RAB5B-204ENST00000548068 FAM71AQ8IYT1 594 aa13.31□□□□□ -0.28
RAB5B-204ENST00000548068 SNX27Q96L92 541 aa13.31□□□□□ -0.28
RAB5B-204ENST00000548068 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.31□□□□□ -0.28
RAB5B-204ENST00000548068 GPR88Q9GZN0 384 aa13.31□□□□□ -0.28
RAB5B-204ENST00000548068 MYO1AQ9UBC5 1043 aa13.31□□□□□ -0.28
RAB5B-204ENST00000548068 FOXN3O00409 490 aaPredicted RBP13.3□□□□□ -0.28
RAB5B-204ENST00000548068 KIF5CO60282 957 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 CHRNA1P02708 482 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 NFICP08651 508 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 CCL5P13501 91 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 P4HA1P13674 534 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 ZSCAN20P17040 1043 aaPredicted RBP13.3□□□□□ -0.28
RAB5B-204ENST00000548068 USP8P40818 1118 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 RAB27AP51159 221 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 PDE6CP51160 858 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 KIF5AQ12840 1032 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 PAK2Q13177 524 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 CUL2Q13617 745 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 TRIM71Q2Q1W2 868 aaKnown RBP13.3□□□□□ -0.28
RAB5B-204ENST00000548068 ZNF699Q32M78 642 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 KIF12Q96FN5 646 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 KREMEN1Q96MU8 473 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 PI4K2AQ9BTU6 479 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 EIF2AQ9BY44 585 aaKnown RBP13.3□□□□□ -0.28
RAB5B-204ENST00000548068 NIF3L1Q9GZT8 377 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 RNF208Q9H0X6 261 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 ST3GAL5Q9UNP4 418 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 PCDHA13Q9Y5I0 950 aa13.3□□□□□ -0.28
RAB5B-204ENST00000548068 RECQL4O94761 1208 aa13.29□□□□□ -0.28
RAB5B-204ENST00000548068 MAGEA1P43355 309 aa13.29□□□□□ -0.28
RAB5B-204ENST00000548068 ETF1P62495 437 aaKnown RBP13.29□□□□□ -0.28
RAB5B-204ENST00000548068 FBXO47Q5MNV8 452 aa13.29□□□□□ -0.28
RAB5B-204ENST00000548068 CCDC122Q5T0U0 273 aa13.29□□□□□ -0.28
RAB5B-204ENST00000548068 UBXN11Q5T124 520 aa13.29□□□□□ -0.28
RAB5B-204ENST00000548068 ZNF571Q7Z3V5 609 aaPredicted RBP13.29□□□□□ -0.28
RAB5B-204ENST00000548068 CTU1Q7Z7A3 348 aaKnown RBP13.29□□□□□ -0.28
RAB5B-204ENST00000548068 BEST2Q8NFU1 509 aa13.29□□□□□ -0.28
RAB5B-204ENST00000548068 KIF18AQ8NI77 898 aa13.29□□□□□ -0.28
RAB5B-204ENST00000548068 CAGE1Q8TC20 777 aa13.29□□□□□ -0.28
RAB5B-204ENST00000548068 TATDN2Q93075 761 aa13.29□□□□□ -0.28
RAB5B-204ENST00000548068 WNT8BQ93098 351 aa13.29□□□□□ -0.28
RAB5B-204ENST00000548068 DEFB118Q96PH6 123 aa13.29□□□□□ -0.28
RAB5B-204ENST00000548068 FAM124BQ9H5Z6 455 aaPredicted RBP13.29□□□□□ -0.28
RAB5B-204ENST00000548068 LZTFL1Q9NQ48 299 aa13.29□□□□□ -0.28
RAB5B-204ENST00000548068 TRMT13Q9NUP7 481 aaKnown RBP13.29□□□□□ -0.28
RAB5B-204ENST00000548068 SNTG2Q9NY99 539 aa13.29□□□□□ -0.28
RAB5B-204ENST00000548068 CNTN3Q9P232 1028 aa13.29□□□□□ -0.28
RAB5B-204ENST00000548068 OGDHLQ9ULD0 1010 aa13.29□□□□□ -0.28
RAB5B-204ENST00000548068 REXO2Q9Y3B8 237 aaKnown RBP13.29□□□□□ -0.28
RAB5B-204ENST00000548068 TLR3O15455 904 aaKnown RBP13.28□□□□□ -0.28
RAB5B-204ENST00000548068 PJA2O43164 708 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 STAU1O95793 577 aaKnown RBP13.28□□□□□ -0.28
RAB5B-204ENST00000548068 KRT19P08727 400 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 PNMA6AP0CW24 399 aaPredicted RBP13.28□□□□□ -0.28
RAB5B-204ENST00000548068 SKIP12755 728 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 KRT5P13647 590 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 TNFAIP3P21580 790 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 MYL6P60660 151 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 RBP5P82980 135 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 CYP27A1Q02318 531 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 GFPT1Q06210 699 aaPredicted RBP13.28□□□□□ -0.28
RAB5B-204ENST00000548068 MYO1EQ12965 1108 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 NFX1Q12986 1120 aaKnown RBP13.28□□□□□ -0.28
RAB5B-204ENST00000548068 BFSP2Q13515 415 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 NAB2Q15742 525 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 PKN2Q16513 984 aaKnown RBP13.28□□□□□ -0.28
RAB5B-204ENST00000548068 ZNF667Q5HYK9 610 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 FBXO46Q6PJ61 603 aaPredicted RBP13.28□□□□□ -0.28
RAB5B-204ENST00000548068 ZNF677Q86XU0 584 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 GPIHBP1Q8IV16 184 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 TTC39CQ8N584 583 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 C1orf127Q8N9H9 656 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 KAT5Q92993 513 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 AGPAT1Q99943 283 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 NXF3Q9H4D5 531 aaKnown RBP13.28□□□□□ -0.28
RAB5B-204ENST00000548068 VRTNQ9H8Y1 702 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 ERVK-5Q9HDB9 667 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.28□□□□□ -0.28
RAB5B-204ENST00000548068 DPP3Q9NY33 737 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 PARP2Q9UGN5 583 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 ADAMTS1Q9UHI8 967 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 INTUQ9ULD6 942 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 UBQLN1Q9UMX0 589 aaKnown RBP13.28□□□□□ -0.28
RAB5B-204ENST00000548068 IPPQ9Y573 584 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 PAXBP1Q9Y5B6 917 aa13.28□□□□□ -0.28
RAB5B-204ENST00000548068 TRIP11Q15643 1979 aa13.27□□□□□ -0.28
RAB5B-204ENST00000548068 A0A087X0T9 212 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 ZNF263O14978 683 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 CD4P01730 458 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 ITGB3P05106 788 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 FAM228BP0C875 321 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 CKBP12277 381 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 KCNE1P15382 129 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms