RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 ZNF131P52739 623 aa18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 POU5F1BQ06416 359 aa18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 CCDC122Q5T0U0 273 aa18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 PDXDC1Q6P996 788 aa18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 PADI6Q6TGC4 694 aa18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 MAEAQ7L5Y9 396 aa18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 TMEM174Q8WUU8 243 aa18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 LPPQ93052 612 aa18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 JAKMIP2Q96AA8 810 aa18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 C11orf84Q9BUA3 381 aaPredicted RBP18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 MKNK1Q9BUB5 465 aa18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 TMEM117Q9H0C3 514 aa18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 ALG13Q9NP73 1137 aaKnown RBP18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 THEGQ9P2T0 379 aa18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 ARMCX3Q9UH62 379 aaPredicted RBP18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 FBXL5Q9UKA1 691 aa18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 REXO2Q9Y3B8 237 aaKnown RBP18.68■□□□□ 0.58
RBFOX1-207ENST00000547338 GTPBP10A4D1E9 387 aaKnown RBP18.67■□□□□ 0.58
RBFOX1-207ENST00000547338 TSPAN1O60635 241 aa18.67■□□□□ 0.58
RBFOX1-207ENST00000547338 FAM13AO94988 1023 aa18.67■□□□□ 0.58
RBFOX1-207ENST00000547338 BMS1Q14692 1282 aaKnown RBP18.67■□□□□ 0.58
RBFOX1-207ENST00000547338 NAA30Q147X3 362 aaPredicted RBP18.67■□□□□ 0.58
RBFOX1-207ENST00000547338 SFR1Q86XK3 245 aa18.67■□□□□ 0.58
RBFOX1-207ENST00000547338 FMNL3Q8IVF7 1028 aa18.67■□□□□ 0.58
RBFOX1-207ENST00000547338 KLHL23Q8NBE8 558 aa18.67■□□□□ 0.58
RBFOX1-207ENST00000547338 SPPL3Q8TCT6 385 aa18.67■□□□□ 0.58
RBFOX1-207ENST00000547338 BAP1Q92560 729 aa18.67■□□□□ 0.58
RBFOX1-207ENST00000547338 NFKBIZQ9BYH8 718 aa18.67■□□□□ 0.58
RBFOX1-207ENST00000547338 POLD4Q9HCU8 107 aa18.67■□□□□ 0.58
RBFOX1-207ENST00000547338 FAM105AQ9NUU6 356 aa18.67■□□□□ 0.58
RBFOX1-207ENST00000547338 PCDHB13Q9Y5F0 798 aa18.67■□□□□ 0.58
RBFOX1-207ENST00000547338 BZW2Q9Y6E2 419 aaKnown RBP18.67■□□□□ 0.58
RBFOX1-207ENST00000547338 BDP1A6H8Y1 2624 aa18.67■□□□□ 0.58
RBFOX1-207ENST00000547338 NPHP3-ACAD11A0A0J9YXS1 232 aa18.66■□□□□ 0.58
RBFOX1-207ENST00000547338 PJA2O43164 708 aa18.66■□□□□ 0.58
RBFOX1-207ENST00000547338 ZNF623O75123 536 aa18.66■□□□□ 0.58
RBFOX1-207ENST00000547338 EOMESO95936 686 aa18.66■□□□□ 0.58
RBFOX1-207ENST00000547338 NR2F2P24468 414 aa18.66■□□□□ 0.58
RBFOX1-207ENST00000547338 KCNMA1Q12791 1236 aa18.66■□□□□ 0.58
RBFOX1-207ENST00000547338 PAPD7Q5XG87 772 aaKnown RBP18.66■□□□□ 0.58
RBFOX1-207ENST00000547338 TWF2Q6IBS0 349 aaKnown RBP18.66■□□□□ 0.58
RBFOX1-207ENST00000547338 RNF169Q8NCN4 708 aa18.66■□□□□ 0.58
RBFOX1-207ENST00000547338 GLIS3Q8NEA6 775 aa18.66■□□□□ 0.58
RBFOX1-207ENST00000547338 HELQQ8TDG4 1101 aa18.66■□□□□ 0.58
RBFOX1-207ENST00000547338 CCDC43Q96MW1 224 aaKnown RBP18.66■□□□□ 0.58
RBFOX1-207ENST00000547338 COL25A1Q9BXS0 654 aaPredicted RBP18.66■□□□□ 0.58
RBFOX1-207ENST00000547338 ZHX3Q9H4I2 956 aa18.66■□□□□ 0.58
RBFOX1-207ENST00000547338 PARVGQ9HBI0 331 aa18.66■□□□□ 0.58
RBFOX1-207ENST00000547338 B4GALT5O43286 388 aa18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 SERPING1P05155 500 aa18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 EPB41P11171 864 aaKnown RBP18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 PRLRP16471 622 aa18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 KLK7P49862 253 aa18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 SNRPFP62306 86 aaKnown RBP18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 COL19A1Q14993 1142 aa18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 C10orf76Q5T2E6 689 aa18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 CDCA2Q69YH5 1023 aaPredicted RBP18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 FBXO38Q6PIJ6 1188 aa18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 NELFCDQ8IXH7 590 aa18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 RNF10Q8N5U6 811 aaKnown RBP18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 COLGALT1Q8NBJ5 622 aa18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 MCPH1Q8NEM0 835 aa18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 TRIM58Q8NG06 486 aa18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 DEF6Q9H4E7 631 aa18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 RNF216Q9NWF9 866 aaPredicted RBP18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 AIPL1Q9NZN9 384 aa18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 TBC1D7Q9P0N9 293 aa18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 GUCA1BQ9UMX6 200 aa18.65■□□□□ 0.58
RBFOX1-207ENST00000547338 ARHGEF35A5YM69 484 aa18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 TTLL13PA6NNM8 815 aa18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 B4GALT3O60512 393 aa18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 AFPP02771 609 aaKnown RBP18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 EDN1P05305 212 aa18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 PBX3P40426 434 aa18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 AFF1P51825 1210 aaKnown RBP18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 TFDP1Q14186 410 aa18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 PTPROQ16827 1216 aa18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 TCEAL5Q5H9L2 206 aa18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 SFMBT2Q5VUG0 894 aa18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 AGMOQ6ZNB7 445 aa18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 RRAGAQ7L523 313 aa18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 MRPL10Q7Z7H8 261 aaKnown RBP18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 DAW1Q8N136 415 aa18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 SMG8Q8ND04 991 aaKnown RBP18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 ATXN2LQ8WWM7 1075 aaKnown RBP18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 EEF2KMTQ96G04 330 aa18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 CPB2Q96IY4 423 aa18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 EIF2AQ9BY44 585 aaKnown RBP18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 IRX2Q9BZI1 471 aaPredicted RBP18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 FAM207AQ9NSI2 230 aaPredicted RBP18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 PCDHB2Q9Y5E7 798 aa18.64■□□□□ 0.58
RBFOX1-207ENST00000547338 NCOR1O75376 2440 aa18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 MUC3AQ02505 3323 aa18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 HOXA2O43364 376 aa18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 AKR1B10O60218 316 aa18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 TACC1O75410 805 aa18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 IRS1P35568 1242 aa18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 AMPD2Q01433 879 aa18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 CKAP4Q07065 602 aaKnown RBP18.64■□□□□ 0.57
RBFOX1-207ENST00000547338 KCNH2Q12809 1159 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms