RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	TRIM42	Q8IWZ5	723 aa		7.73	□□□□□ -1.17
LDHA-223	ENST00000545215	MIGA1	Q8NAN2	632 aa		7.73	□□□□□ -1.17
LDHA-223	ENST00000545215	PPTC7	Q8NI37	304 aa		7.73	□□□□□ -1.17
LDHA-223	ENST00000545215	NKD1	Q969G9	470 aa		7.73	□□□□□ -1.17
LDHA-223	ENST00000545215	EAF2	Q96CJ1	260 aa	Predicted RBP	7.73	□□□□□ -1.17
LDHA-223	ENST00000545215	MRFAP1L1	Q96HT8	127 aa		7.73	□□□□□ -1.17
LDHA-223	ENST00000545215	SIRPG	Q9P1W8	387 aa		7.73	□□□□□ -1.17
LDHA-223	ENST00000545215	NDRG2	Q9UN36	371 aa	Known RBP	7.73	□□□□□ -1.17
LDHA-223	ENST00000545215	PCDHB7	Q9Y5E2	793 aa		7.73	□□□□□ -1.17
LDHA-223	ENST00000545215	MGA	Q8IWI9	3026 aa		7.73	□□□□□ -1.17
LDHA-223	ENST00000545215	LRBA	P50851	2863 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	TTC41P	Q6P2S7	1318 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	SPAG17	Q6Q759	2223 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	CCDC195	A0A1B0GUA6	201 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215		J3QW42	95 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	SMIM10L2A	P0DMW4	78 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	SMIM10L2B	P0DMW5	78 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	BMP3	P12645	472 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	MGAT3	Q09327	533 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	SEMA3B	Q13214	749 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	RAB33A	Q14088	237 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	TMED8	Q6PL24	325 aa	Predicted RBP	7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	AACS	Q86V21	672 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	ASAP3	Q8TDY4	903 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	DYNLL2	Q96FJ2	89 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	ZNF558	Q96NG5	402 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	MPHOSPH6	Q99547	160 aa	Known RBP	7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	C16orf70	Q9BSU1	422 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	TRIM4	Q9C037	500 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	ZNF768	Q9H5H4	540 aa	Known RBP	7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	AGO3	Q9H9G7	860 aa	Known RBP	7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	IL1RAPL2	Q9NP60	686 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	HEBP1	Q9NRV9	189 aa		7.72	□□□□□ -1.17
LDHA-223	ENST00000545215	ASCC3	Q8N3C0	2202 aa	Known RBP	7.71	□□□□□ -1.17
LDHA-223	ENST00000545215	MAN2B1	O00754	1011 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	TERT	O14746	1132 aa	Known RBP	7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	AKAP3	O75969	853 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	PAPLN	O95428	1278 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	FGFR3	P22607	806 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	CD52	P31358	61 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	PBX3	P40426	434 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	SARS	P49591	514 aa	Known RBP	7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	CLCN4	P51793	760 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	ADAM17	P78536	824 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	CREB5	Q02930	508 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	PLK5	Q496M5	336 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	PDXDC1	Q6P996	788 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	LRRC55	Q6ZSA7	311 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	AUTS2	Q8WXX7	1259 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	SRRT	Q9BXP5	876 aa	Known RBP	7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	ZBP1	Q9H171	429 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	MUC3B	Q9H195	1237 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	ADAMTS10	Q9H324	1103 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	ANTXR1	Q9H6X2	564 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	ECHDC1	Q9NTX5	307 aa		7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	GPN3	Q9UHW5	284 aa	Predicted RBP	7.71	□□□□□ -1.18
LDHA-223	ENST00000545215	USP9Y	O00507	2555 aa	Predicted RBP	7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	CACNA1E	Q15878	2313 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	FRMPD4	Q14CM0	1322 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	CCDC163	A0A0D9SF12	145 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	FAM221A	A4D161	298 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	TRABD2B	A6NFA1	517 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	MEFV	O15553	781 aa	Predicted RBP	7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	F13A1	P00488	732 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	CCDC192	P0DO97	292 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	CHRNB1	P11230	501 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	GNAT1	P11488	350 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	ATP5J	P18859	108 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	MX1	P20591	662 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	HOXC13	P31276	330 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	EIF2S3	P41091	472 aa	Known RBP	7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	IRX4	P78413	519 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	HNRNPD	Q14103	355 aa	Known RBP	7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	TCEAL1	Q15170	157 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	BNC2	Q6ZN30	1099 aa	Predicted RBP	7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	MTSS1L	Q765P7	747 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	VPS52	Q8N1B4	723 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	SLC39A11	Q8N1S5	342 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	FBXO27	Q8NI29	283 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	CPLX3	Q8WVH0	158 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	GATAD2B	Q8WXI9	593 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	GTPBP3	Q969Y2	492 aa	Known RBP	7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	ANAPC16	Q96DE5	110 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	DUSP15	Q9H1R2	295 aa	Predicted RBP	7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	SETD4	Q9NVD3	440 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	MCM9	Q9NXL9	1143 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	PCDHB5	Q9Y5E4	795 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	SQOR	Q9Y6N5	450 aa		7.7	□□□□□ -1.18
LDHA-223	ENST00000545215	CCDC194	A0A1B0GVG4	234 aa		7.69	□□□□□ -1.18
LDHA-223	ENST00000545215		B4DLN1	442 aa		7.69	□□□□□ -1.18
LDHA-223	ENST00000545215	CTSA	P10619	480 aa		7.69	□□□□□ -1.18
LDHA-223	ENST00000545215	BMP6	P22004	513 aa		7.69	□□□□□ -1.18
LDHA-223	ENST00000545215	MRPL12	P52815	198 aa	Known RBP	7.69	□□□□□ -1.18
LDHA-223	ENST00000545215	RHD	Q02161	417 aa		7.69	□□□□□ -1.18
LDHA-223	ENST00000545215	TTF1	Q15361	905 aa	Predicted RBP	7.69	□□□□□ -1.18
LDHA-223	ENST00000545215	PCSK7	Q16549	785 aa		7.69	□□□□□ -1.18
LDHA-223	ENST00000545215	SEZ6	Q53EL9	994 aa		7.69	□□□□□ -1.18
LDHA-223	ENST00000545215	HIST2H2BC	Q6DN03	193 aa		7.69	□□□□□ -1.18
LDHA-223	ENST00000545215	GET4	Q7L5D6	327 aa	Predicted RBP	7.69	□□□□□ -1.18
LDHA-223	ENST00000545215	DNER	Q8NFT8	737 aa		7.69	□□□□□ -1.18

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