RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CYP3A5P20815 502 aa17.1■□□□□ 0.33
CCDC78-216ENST00000544996 AFMP43652 599 aa17.1■□□□□ 0.33
CCDC78-216ENST00000544996 ACOT2P49753 483 aa17.1■□□□□ 0.33
CCDC78-216ENST00000544996 POU5F1Q01860 360 aaKnown RBP17.1■□□□□ 0.33
CCDC78-216ENST00000544996 SPAG1Q07617 926 aa17.1■□□□□ 0.33
CCDC78-216ENST00000544996 PSMD5Q16401 504 aa17.1■□□□□ 0.33
CCDC78-216ENST00000544996 ATAT1Q5SQI0 421 aa17.1■□□□□ 0.33
CCDC78-216ENST00000544996 RARS2Q5T160 578 aaKnown RBP17.1■□□□□ 0.33
CCDC78-216ENST00000544996 PRSS55Q6UWB4 352 aaPredicted RBP17.1■□□□□ 0.33
CCDC78-216ENST00000544996 C3orf58Q8NDZ4 430 aa17.1■□□□□ 0.33
CCDC78-216ENST00000544996 PHF7Q9BWX1 381 aaPredicted RBP17.1■□□□□ 0.33
CCDC78-216ENST00000544996 TUBGCP4Q9UGJ1 667 aa17.1■□□□□ 0.33
CCDC78-216ENST00000544996 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.09■□□□□ 0.33
CCDC78-216ENST00000544996 A0A1B0GVL5 298 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 C19orf67A6NJJ6 358 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 PRPF6O94906 941 aaKnown RBP17.09■□□□□ 0.33
CCDC78-216ENST00000544996 LDHAP00338 332 aaKnown RBP17.09■□□□□ 0.33
CCDC78-216ENST00000544996 ADRB2P07550 413 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 RPL17P18621 184 aaKnown RBP17.09■□□□□ 0.33
CCDC78-216ENST00000544996 FGFR3P22607 806 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 MTHFRP42898 656 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 ZBTB6Q15916 424 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 FAM26FQ5R3K3 315 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 UNC13DQ70J99 1090 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 PALB2Q86YC2 1186 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 GLYCTKQ8IVS8 523 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 C12orf76Q8N812 135 aaPredicted RBP17.09■□□□□ 0.33
CCDC78-216ENST00000544996 LNX1Q8TBB1 728 aaPredicted RBP17.09■□□□□ 0.33
CCDC78-216ENST00000544996 HDAC7Q8WUI4 952 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 BLZF1Q9H2G9 400 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 PLEKHA4Q9H4M7 779 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 ASB7Q9H672 318 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 CD320Q9NPF0 282 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 MAN1C1Q9NR34 630 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 SERTAD1Q9UHV2 236 aa17.09■□□□□ 0.33
CCDC78-216ENST00000544996 PVALEFA0A1B0GWK0 134 aa17.08■□□□□ 0.32
CCDC78-216ENST00000544996 GARTP22102 1010 aa17.08■□□□□ 0.32
CCDC78-216ENST00000544996 IGFBP6P24592 240 aaPredicted RBP17.08■□□□□ 0.32
CCDC78-216ENST00000544996 ADSSP30520 456 aa17.08■□□□□ 0.32
CCDC78-216ENST00000544996 MCM4P33991 863 aa17.08■□□□□ 0.32
CCDC78-216ENST00000544996 SYKP43405 635 aa17.08■□□□□ 0.32
CCDC78-216ENST00000544996 BRCC3P46736 316 aa17.08■□□□□ 0.32
CCDC78-216ENST00000544996 CD300LGQ6UXG3 332 aa17.08■□□□□ 0.32
CCDC78-216ENST00000544996 TMC5Q6UXY8 1006 aa17.08■□□□□ 0.32
CCDC78-216ENST00000544996 ANKS3Q6ZW76 656 aa17.08■□□□□ 0.32
CCDC78-216ENST00000544996 BEST2Q8NFU1 509 aa17.08■□□□□ 0.32
CCDC78-216ENST00000544996 HPS3Q969F9 1004 aa17.08■□□□□ 0.32
CCDC78-216ENST00000544996 FGFBP2Q9BYJ0 223 aa17.08■□□□□ 0.32
CCDC78-216ENST00000544996 IKZF4Q9H2S9 585 aa17.08■□□□□ 0.32
CCDC78-216ENST00000544996 HPSEQ9Y251 543 aa17.08■□□□□ 0.32
CCDC78-216ENST00000544996 DERAQ9Y315 318 aa17.08■□□□□ 0.32
CCDC78-216ENST00000544996 TTC28Q96AY4 2481 aa17.08■□□□□ 0.32
CCDC78-216ENST00000544996 A0A1W2PQ27 194 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 A0A1W2PQ64 194 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 A0A1W2PQD8 194 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 I3L4J1 428 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 TULP1O00294 542 aaPredicted RBP17.07■□□□□ 0.32
CCDC78-216ENST00000544996 SYN3O14994 580 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 KIAA0391O15091 583 aaKnown RBP17.07■□□□□ 0.32
CCDC78-216ENST00000544996 EIF3DO15371 548 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCDC78-216ENST00000544996 TGM5O43548 720 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 ACTN4O43707 911 aaKnown RBP17.07■□□□□ 0.32
CCDC78-216ENST00000544996 IL18RAPO95256 599 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 TKTP29401 623 aaKnown RBP17.07■□□□□ 0.32
CCDC78-216ENST00000544996 CASP1P29466 404 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 LRPAP1P30533 357 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 CUL4BQ13620 913 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 TMEM132DQ14C87 1099 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 JADE1Q6IE81 842 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 PAGE5Q96GU1 130 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 RPGRIP1Q96KN7 1286 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 CLSTN3Q9BQT9 956 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 FAM213AQ9BRX8 229 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 C2CD2Q9Y426 696 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 BACE2Q9Y5Z0 518 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 CUL9Q8IWT3 2517 aa17.07■□□□□ 0.32
CCDC78-216ENST00000544996 GOLGA6L4A6NEF3 574 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 MYL1P05976 194 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 SPATA31D3P0C874 917 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 SPATA1Q5VX52 437 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 KANK3Q6NY19 840 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 ARMCX5Q6P1M9 558 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 LILRA6Q6PI73 481 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 CYP26C1Q6V0L0 522 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 C15orf39Q6ZRI6 1047 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 SPATA31D4Q6ZUB0 917 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 GPR149Q86SP6 731 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 FSIP1Q8NA03 581 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 KREMEN2Q8NCW0 462 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 APPL2Q8NEU8 664 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 SAAL1Q96ER3 474 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 SUSD3Q96L08 255 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 GDPD2Q9HCC8 539 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 MTRRQ9UBK8 725 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 NR2E1Q9Y466 385 aa17.06■□□□□ 0.32
CCDC78-216ENST00000544996 UBE4BO95155 1302 aa17.05■□□□□ 0.32
CCDC78-216ENST00000544996 FAM237AA0A1B0GTK4 181 aa17.05■□□□□ 0.32
CCDC78-216ENST00000544996 H7C4K7 107 aa17.05■□□□□ 0.32
CCDC78-216ENST00000544996 EXTL3O43909 919 aa17.05■□□□□ 0.32
CCDC78-216ENST00000544996 NFICP08651 508 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms