RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 KREMEN2Q8NCW0 462 aa15.16■□□□□ 0.02
VAMP1-208ENST00000544432 FOXD4L4Q8WXT5 416 aaPredicted RBP15.16■□□□□ 0.02
VAMP1-208ENST00000544432 C18orf25Q96B23 403 aaPredicted RBP15.16■□□□□ 0.02
VAMP1-208ENST00000544432 MSTO1Q9BUK6 570 aa15.16■□□□□ 0.02
VAMP1-208ENST00000544432 MRPL44Q9H9J2 332 aaKnown RBP15.16■□□□□ 0.02
VAMP1-208ENST00000544432 RPF1Q9H9Y2 349 aaKnown RBP15.16■□□□□ 0.02
VAMP1-208ENST00000544432 KBTBD4Q9NVX7 518 aa15.16■□□□□ 0.02
VAMP1-208ENST00000544432 CPSF3Q9UKF6 684 aaKnown RBP15.16■□□□□ 0.02
VAMP1-208ENST00000544432 RCOR1Q9UKL0 485 aa15.16■□□□□ 0.02
VAMP1-208ENST00000544432 PCDHB13Q9Y5F0 798 aa15.16■□□□□ 0.02
VAMP1-208ENST00000544432 LACTBL1A8MY62 500 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 C2CD4DB7Z1M9 353 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 ANKRD63C9JTQ0 380 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 XPOTO43592 962 aaKnown RBP15.15■□□□□ 0.02
VAMP1-208ENST00000544432 ZMYND10O75800 440 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 WEE2P0C1S8 567 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 PAX3P23760 479 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 TNFSF9P41273 254 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 BRCC3P46736 316 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 AMPD3Q01432 767 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 PPP2R3AQ06190 1150 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 PKP1Q13835 747 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 L1TD1Q5T7N2 865 aaKnown RBP15.15■□□□□ 0.02
VAMP1-208ENST00000544432 SHC4Q6S5L8 630 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 PDILTQ8N807 584 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 IQUBQ8NA54 791 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 ZNF707Q96C28 371 aaPredicted RBP15.15■□□□□ 0.02
VAMP1-208ENST00000544432 SUSD3Q96L08 255 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 ACCSQ96QU6 501 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 WDR6Q9NNW5 1121 aaKnown RBP15.15■□□□□ 0.02
VAMP1-208ENST00000544432 FBXW11Q9UKB1 542 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 UBQLN1Q9UMX0 589 aaKnown RBP15.15■□□□□ 0.02
VAMP1-208ENST00000544432 EXOC7Q9UPT5 735 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 DERAQ9Y315 318 aa15.15■□□□□ 0.02
VAMP1-208ENST00000544432 ADAM12O43184 909 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 POU2F2P09086 479 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 HNRNPA1P09651 372 aaKnown RBP eCLIP15.14■□□□□ 0.01
VAMP1-208ENST00000544432 SPATA31D3P0C874 917 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 IDEP14735 1019 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 COL9A1P20849 921 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 TKTP29401 623 aaKnown RBP15.14■□□□□ 0.01
VAMP1-208ENST00000544432 HOXA9P31269 272 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 ZXDAP98168 799 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 MRPL58Q14197 206 aaKnown RBP15.14■□□□□ 0.01
VAMP1-208ENST00000544432 PTPN21Q16825 1174 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 UVSSAQ2YD98 709 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 ZBTB41Q5SVQ8 909 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 ADALQ6DHV7 355 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 SPATA31D4Q6ZUB0 917 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 CCDC149Q6ZUS6 474 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 OTOP3Q7RTS5 596 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 CCDC65Q8IXS2 484 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 TDRD5Q8NAT2 981 aaKnown RBP15.14■□□□□ 0.01
VAMP1-208ENST00000544432 SPRYD3Q8NCJ5 442 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 KIF12Q96FN5 646 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 PRKD2Q9BZL6 878 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 ASB7Q9H672 318 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 MAGEF1Q9HAY2 307 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 TSHZ2Q9NRE2 1034 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 PANK4Q9NVE7 773 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 AGO2Q9UKV8 859 aaKnown RBP15.14■□□□□ 0.01
VAMP1-208ENST00000544432 PCDHA7Q9UN72 937 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 NUB1Q9Y5A7 615 aa15.14■□□□□ 0.01
VAMP1-208ENST00000544432 FAM86C2PA6NEL3 165 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 TBC1D4O60343 1298 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 RFPL2O75678 378 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 ADSSP30520 456 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 OR1D2P34982 312 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 ME1P48163 572 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 AARSP49588 968 aaKnown RBP eCLIP15.13■□□□□ 0.01
VAMP1-208ENST00000544432 DNM1Q05193 864 aaKnown RBP15.13■□□□□ 0.01
VAMP1-208ENST00000544432 VARS2Q5ST30 1063 aaKnown RBP15.13■□□□□ 0.01
VAMP1-208ENST00000544432 SPATA1Q5VX52 437 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 SLC8B1Q6J4K2 584 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 RSPO2Q6UXX9 243 aaPredicted RBP15.13■□□□□ 0.01
VAMP1-208ENST00000544432 BMP8AQ7Z5Y6 402 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 GLYCTKQ8IVS8 523 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 APPL2Q8NEU8 664 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 FEZF2Q8TBJ5 459 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 SMG7Q92540 1137 aaKnown RBP15.13■□□□□ 0.01
VAMP1-208ENST00000544432 STAMQ92783 540 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 ACSF2Q96CM8 615 aaPredicted RBP15.13■□□□□ 0.01
VAMP1-208ENST00000544432 PYM1Q9BRP8 204 aaKnown RBP15.13■□□□□ 0.01
VAMP1-208ENST00000544432 TRIM9Q9C026 710 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 FAM13BQ9NYF5 915 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 TUBGCP4Q9UGJ1 667 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 MYH15Q9Y2K3 1946 aa15.13■□□□□ 0.01
VAMP1-208ENST00000544432 MTCL1Q9Y4B5 1905 aaKnown RBP15.13■□□□□ 0.01
VAMP1-208ENST00000544432 PLXNA3P51805 1871 aa15.12■□□□□ 0.01
VAMP1-208ENST00000544432 VWA8A3KMH1 1905 aa15.12■□□□□ 0.01
VAMP1-208ENST00000544432 H7C4K7 107 aa15.12■□□□□ 0.01
VAMP1-208ENST00000544432 I3L4J1 428 aa15.12■□□□□ 0.01
VAMP1-208ENST00000544432 M0QZQ0 153 aa15.12■□□□□ 0.01
VAMP1-208ENST00000544432 GCNT3O95395 438 aa15.12■□□□□ 0.01
VAMP1-208ENST00000544432 FOXD4L6Q3SYB3 417 aaPredicted RBP15.12■□□□□ 0.01
VAMP1-208ENST00000544432 LIN9Q5TKA1 542 aa15.12■□□□□ 0.01
VAMP1-208ENST00000544432 RESP18Q5W5W9 173 aa15.12■□□□□ 0.01
VAMP1-208ENST00000544432 FOXD4L3Q6VB84 417 aaPredicted RBP15.12■□□□□ 0.01
VAMP1-208ENST00000544432 TRIM67Q6ZTA4 783 aa15.12■□□□□ 0.01
VAMP1-208ENST00000544432 BEST2Q8NFU1 509 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms