RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.08□□□□□ -0.96
ABCB1-210ENST00000543898 SCG3Q8WXD2 468 aaKnown RBP9.08□□□□□ -0.96
ABCB1-210ENST00000543898 ART4Q93070 314 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 TEKT1Q969V4 418 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 VTI1AQ96AJ9 217 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 L3MBTL3Q96JM7 780 aaPredicted RBP9.08□□□□□ -0.96
ABCB1-210ENST00000543898 ZMAT2Q96NC0 199 aaKnown RBP9.08□□□□□ -0.96
ABCB1-210ENST00000543898 OSBPL8Q9BZF1 889 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 STXBP5LQ9Y2K9 1186 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 ASTN1O14525 1302 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 SMNDC1O75940 238 aaKnown RBP eCLIP9.08□□□□□ -0.96
ABCB1-210ENST00000543898 KRT10P13645 584 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 MARSP56192 900 aaKnown RBP9.08□□□□□ -0.96
ABCB1-210ENST00000543898 PPP4CP60510 307 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 TMPRSS15P98073 1019 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 SYDE2Q5VT97 1194 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 RBBP8NLQ8NC74 664 aaPredicted RBP9.08□□□□□ -0.96
ABCB1-210ENST00000543898 DHX38Q92620 1227 aaKnown RBP9.08□□□□□ -0.96
ABCB1-210ENST00000543898 ACSF2Q96CM8 615 aaPredicted RBP9.08□□□□□ -0.96
ABCB1-210ENST00000543898 CCDC124Q96CT7 223 aaKnown RBP9.08□□□□□ -0.96
ABCB1-210ENST00000543898 CBWD1Q9BRT8 395 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 LXNQ9BS40 222 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 THTPAQ9BU02 230 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 TUBB6Q9BUF5 446 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 F5H6K3 240 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 CREB3O43889 395 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 DLG4P78352 724 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 COG7P83436 770 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 GRAPQ13588 217 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 GRAMD1BQ3KR37 738 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 ZNF394Q53GI3 561 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 TLDC1Q6P9B6 456 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 RAB3IL1Q8TBN0 382 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 GRAPLQ8TC17 118 aaPredicted RBP9.08□□□□□ -0.96
ABCB1-210ENST00000543898 JDP2Q8WYK2 163 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 TSSK1BQ9BXA7 367 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 NDE1Q9NXR1 346 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 UVRAGQ9P2Y5 699 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 SMG5Q9UPR3 1016 aaKnown RBP9.08□□□□□ -0.96
ABCB1-210ENST00000543898 SUGT1Q9Y2Z0 365 aa9.08□□□□□ -0.96
ABCB1-210ENST00000543898 CCDC189A1A4V9 331 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 GTPBP10A4D1E9 387 aaKnown RBP9.07□□□□□ -0.96
ABCB1-210ENST00000543898 SPDYE5A6NIY4 337 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 H3BRJ5 948 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 TLR3O15455 904 aaKnown RBP9.07□□□□□ -0.96
ABCB1-210ENST00000543898 LPXNO60711 386 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 PTPN4P29074 926 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 GPSM2P81274 684 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 FAM98CQ17RN3 349 aaKnown RBP9.07□□□□□ -0.96
ABCB1-210ENST00000543898 ABCB5Q2M3G0 1257 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 BRDTQ58F21 947 aaPredicted RBP9.07□□□□□ -0.96
ABCB1-210ENST00000543898 RHPN2Q8IUC4 686 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 CYP4X1Q8N118 509 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 TMCO5AQ8N6Q1 288 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 TBC1D16Q8TBP0 767 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 RBM17Q96I25 401 aaKnown RBP9.07□□□□□ -0.96
ABCB1-210ENST00000543898 CCDC17Q96LX7 622 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 SLC13A1Q9BZW2 595 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 ARHGEF3Q9NR81 526 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 LRRC4BQ9NT99 713 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 ZMYND8Q9ULU4 1186 aaPredicted RBP9.07□□□□□ -0.96
ABCB1-210ENST00000543898 EML1O00423 815 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 PECAM1P16284 738 aaPredicted RBP9.07□□□□□ -0.96
ABCB1-210ENST00000543898 RPA3P35244 121 aaPredicted RBP9.07□□□□□ -0.96
ABCB1-210ENST00000543898 PTGIRP43119 386 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 PRELPP51888 382 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 KPNB1Q14974 876 aaKnown RBP9.07□□□□□ -0.96
ABCB1-210ENST00000543898 C11orf63Q6NUN7 778 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 TRIM42Q8IWZ5 723 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 RHOT1Q8IXI2 618 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 ST13P4Q8IZP2 240 aaPredicted RBP9.07□□□□□ -0.96
ABCB1-210ENST00000543898 NSL1Q96IY1 281 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 CENPKQ9BS16 269 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 MKNK1Q9BUB5 465 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 RTFDC1Q9BY42 306 aaPredicted RBP9.07□□□□□ -0.96
ABCB1-210ENST00000543898 ZWILCHQ9H900 591 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 HSPBP1Q9NZL4 362 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 DAGLAQ9Y4D2 1042 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 FAM86B1E9PN63 330 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 FAM86B2P0C5J1 330 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 TAC1P20366 129 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 PCNX4Q63HM2 1172 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 RGS9BPQ6ZS82 235 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 PDIK1LQ8N165 341 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 MRPL47Q9HD33 250 aaKnown RBP9.07□□□□□ -0.96
ABCB1-210ENST00000543898 GTF3C4Q9UKN8 822 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 MAD1L1Q9Y6D9 718 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 MYH7P12883 1935 aa9.07□□□□□ -0.96
ABCB1-210ENST00000543898 GPR75-ASB3A0A0A6YYF3 556 aa9.06□□□□□ -0.96
ABCB1-210ENST00000543898 TGFB1I1O43294 461 aa9.06□□□□□ -0.96
ABCB1-210ENST00000543898 KRT36O76013 467 aa9.06□□□□□ -0.96
ABCB1-210ENST00000543898 ZSCAN5DPP0CG00 497 aa9.06□□□□□ -0.96
ABCB1-210ENST00000543898 PPATQ06203 517 aa9.06□□□□□ -0.96
ABCB1-210ENST00000543898 RNF43Q68DV7 783 aa9.06□□□□□ -0.96
ABCB1-210ENST00000543898 KRT39Q6A163 491 aa9.06□□□□□ -0.96
ABCB1-210ENST00000543898 CASC4Q6P4E1 433 aa9.06□□□□□ -0.96
ABCB1-210ENST00000543898 C3orf62Q6ZUJ4 267 aa9.06□□□□□ -0.96
ABCB1-210ENST00000543898 ZNF720Q7Z2F6 126 aa9.06□□□□□ -0.96
ABCB1-210ENST00000543898 HAUS6Q7Z4H7 955 aa9.06□□□□□ -0.96
ABCB1-210ENST00000543898 NOP9Q86U38 636 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms