RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 DERAQ9Y315 318 aa14.27□□□□□ -0.13
LTBR-208ENST00000541005 PODXLO00592 558 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 TEX28O15482 410 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 LRPAP1P30533 357 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 CA8P35219 290 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 HOXD13P35453 343 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 SYKP43405 635 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 AFMP43652 599 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 NDUFA8P51970 172 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 CUL4BQ13620 913 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 CLUL1Q15846 466 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 BMT2Q1RMZ1 405 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 RTP2Q5QGT7 225 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 FAM171A1Q5VUB5 890 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 LLGL2Q6P1M3 1020 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 PDXDC1Q6P996 788 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 CRELD2Q6UXH1 353 aaPredicted RBP14.26□□□□□ -0.13
LTBR-208ENST00000541005 TMEM87AQ8NBN3 555 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 GLIS3Q8NEA6 775 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 ZNF507Q8TCN5 953 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 HASPINQ8TF76 798 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 RIN2Q8WYP3 895 aaPredicted RBP14.26□□□□□ -0.13
LTBR-208ENST00000541005 POMGNT1Q8WZA1 660 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 HPS3Q969F9 1004 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 PAGE5Q96GU1 130 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 B3GALT6Q96L58 329 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 BLZF1Q9H2G9 400 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 ASB7Q9H672 318 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 TUBGCP4Q9UGJ1 667 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 UBQLN1Q9UMX0 589 aaKnown RBP14.26□□□□□ -0.13
LTBR-208ENST00000541005 C5orf42Q9H799 3197 aa14.26□□□□□ -0.13
LTBR-208ENST00000541005 MUC3AQ02505 3323 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 LACTBL1A8MY62 500 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 C2CD2LO14523 706 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 KIAA0391O15091 583 aaKnown RBP14.25□□□□□ -0.13
LTBR-208ENST00000541005 XPOTO43592 962 aaKnown RBP14.25□□□□□ -0.13
LTBR-208ENST00000541005 TRAPPC3O43617 180 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 KLRC4O43908 158 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 PRPF6O94906 941 aaKnown RBP14.25□□□□□ -0.13
LTBR-208ENST00000541005 PAPLNO95428 1278 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 EPCAMP16422 314 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 IGFBP6P24592 240 aaPredicted RBP14.25□□□□□ -0.13
LTBR-208ENST00000541005 CASP1P29466 404 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 ACOT2P49753 483 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 TPRNQ4KMQ1 711 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 GRAMD1CQ8IYS0 662 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 SYCP3Q8IZU3 236 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 FSIP1Q8NA03 581 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 KIF12Q96FN5 646 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 NECAB3Q96P71 396 aaPredicted RBP14.25□□□□□ -0.13
LTBR-208ENST00000541005 GOLPH3LQ9H4A5 285 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 GDPD2Q9HCC8 539 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 C2CD2Q9Y426 696 aa14.25□□□□□ -0.13
LTBR-208ENST00000541005 USP15Q9Y4E8 981 aaPredicted RBP14.25□□□□□ -0.13
LTBR-208ENST00000541005 NOTCH4Q99466 2003 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 C19orf67A6NJJ6 358 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 SYN3O14994 580 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 IL18RAPO95256 599 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 KLRC2P26717 231 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 AARSP49588 968 aaKnown RBP eCLIP14.24□□□□□ -0.13
LTBR-208ENST00000541005 SNRPFP62306 86 aaKnown RBP14.24□□□□□ -0.13
LTBR-208ENST00000541005 ZP2Q05996 745 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 ITIH3Q06033 890 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 SPATA1Q5VX52 437 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 BRSK2Q8IWQ3 736 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 ADHFE1Q8IWW8 467 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 LNX1Q8TBB1 728 aaPredicted RBP14.24□□□□□ -0.13
LTBR-208ENST00000541005 HDAC7Q8WUI4 952 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 SCFD1Q8WVM8 642 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 SUSD3Q96L08 255 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 FBXL18Q96ME1 805 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 CBWD1Q9BRT8 395 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 RHOBTB2Q9BYZ6 727 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 ADAM7Q9H2U9 754 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 MTRRQ9UBK8 725 aa14.24□□□□□ -0.13
LTBR-208ENST00000541005 TNFRSF10AO00220 468 aa14.23□□□□□ -0.13
LTBR-208ENST00000541005 EXTL3O43909 919 aa14.23□□□□□ -0.13
LTBR-208ENST00000541005 LDHAP00338 332 aaKnown RBP14.23□□□□□ -0.13
LTBR-208ENST00000541005 GLUD1P00367 558 aa14.23□□□□□ -0.13
LTBR-208ENST00000541005 NFICP08651 508 aa14.23□□□□□ -0.13
LTBR-208ENST00000541005 SPAG1Q07617 926 aa14.23□□□□□ -0.13
LTBR-208ENST00000541005 TMEM132DQ14C87 1099 aa14.23□□□□□ -0.13
LTBR-208ENST00000541005 PSMD5Q16401 504 aa14.23□□□□□ -0.13
LTBR-208ENST00000541005 JADE1Q6IE81 842 aa14.23□□□□□ -0.13
LTBR-208ENST00000541005 PRSS55Q6UWB4 352 aaPredicted RBP14.23□□□□□ -0.13
LTBR-208ENST00000541005 KRBA2Q6ZNG9 492 aa14.23□□□□□ -0.13
LTBR-208ENST00000541005 NT5DC4Q86YG4 428 aa14.23□□□□□ -0.13
LTBR-208ENST00000541005 CMASQ8NFW8 434 aaPredicted RBP14.23□□□□□ -0.13
LTBR-208ENST00000541005 POP1Q99575 1024 aaKnown RBP14.23□□□□□ -0.13
LTBR-208ENST00000541005 SFXN1Q9H9B4 322 aa14.23□□□□□ -0.13
LTBR-208ENST00000541005 DPP7Q9UHL4 492 aa14.23□□□□□ -0.13
LTBR-208ENST00000541005 BACE2Q9Y5Z0 518 aa14.23□□□□□ -0.13
LTBR-208ENST00000541005 TGFB1I1O43294 461 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 ZNF202O95125 648 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 PAX3P23760 479 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 TKTP29401 623 aaKnown RBP14.22□□□□□ -0.13
LTBR-208ENST00000541005 BRCC3P46736 316 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 PSMD2Q13200 908 aa14.22□□□□□ -0.13
LTBR-208ENST00000541005 CBX2Q14781 532 aaPredicted RBP14.22□□□□□ -0.13
LTBR-208ENST00000541005 ARMCX5Q6P1M9 558 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms