RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 SPIRE2Q8WWL2 714 aa18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 NUB1Q9Y5A7 615 aa18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 PCDHB2Q9Y5E7 798 aa18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 NCANO14594 1321 aa18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 H0YCG3 227 aa18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 PHF2O75151 1096 aa18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 CST3P01034 146 aaPredicted RBP18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 PSMC4P43686 418 aa18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 RPL21P46778 160 aaKnown RBP18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 RAP1GAPP47736 663 aa18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 IREB2P48200 963 aaKnown RBP18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 GPC3P51654 580 aa18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 KRT17Q04695 432 aa18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 UAP1Q16222 522 aaPredicted RBP18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 WNT8AQ9H1J5 351 aa18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 CHST7Q9NS84 486 aa18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 AFG3L2Q9Y4W6 797 aa18.22■□□□□ 0.51
EPB41L3-204ENST00000540638 PRKCBP05771 671 aa18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 ZNF844Q08AG5 666 aa18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 CUL2Q13617 745 aa18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 CAPSQ13938 189 aa18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 TTC27Q6P3X3 843 aa18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 ASCC2Q9H1I8 757 aaPredicted RBP18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 PDGFCQ9NRA1 345 aa18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 ZNF148Q9UQR1 794 aa18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 PASKQ96RG2 1323 aa18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 COL2A1P02458 1487 aaPredicted RBP18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 EIF3HO15372 352 aaKnown RBP eCLIP18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 RALAP11233 206 aa18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 NEDD9Q14511 834 aa18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 XRRA1Q6P2D8 792 aa18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 TMC3Q7Z5M5 1100 aa18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 C1orf131Q8NDD1 294 aaKnown RBP18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 ZWILCHQ9H900 591 aa18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 LRRC4CQ9HCJ2 640 aa18.21■□□□□ 0.51
EPB41L3-204ENST00000540638 B4GALT5O43286 388 aa18.21■□□□□ 0.5
EPB41L3-204ENST00000540638 CAND2O75155 1236 aa18.21■□□□□ 0.5
EPB41L3-204ENST00000540638 GARTP22102 1010 aa18.21■□□□□ 0.5
EPB41L3-204ENST00000540638 LSP1P33241 339 aa18.21■□□□□ 0.5
EPB41L3-204ENST00000540638 CETN2P41208 172 aa18.21■□□□□ 0.5
EPB41L3-204ENST00000540638 SMTNL2Q2TAL5 461 aa18.21■□□□□ 0.5
EPB41L3-204ENST00000540638 SYCP2LQ5T4T6 812 aa18.21■□□□□ 0.5
EPB41L3-204ENST00000540638 SLFN12LQ6IEE8 588 aa18.21■□□□□ 0.5
EPB41L3-204ENST00000540638 ARFGAP2Q8N6H7 521 aa18.21■□□□□ 0.5
EPB41L3-204ENST00000540638 SAMD3Q8N6K7 520 aa18.21■□□□□ 0.5
EPB41L3-204ENST00000540638 RDM1Q8NG50 284 aa18.21■□□□□ 0.5
EPB41L3-204ENST00000540638 TMC2Q8TDI7 906 aa18.21■□□□□ 0.5
EPB41L3-204ENST00000540638 GZMAP12544 262 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 IFT88Q13099 833 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 CLEC16AQ2KHT3 1053 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 WDR72Q3MJ13 1102 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 PORCNQ9H237 461 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 EFCC1Q9HA90 598 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 TMEM59LQ9UK28 342 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 AGTPBP1Q9UPW5 1226 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 SNCAIPQ9Y6H5 919 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 LRRD1A4D1F6 860 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 SOWAHBA6NEL2 793 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 CHRNA3P32297 505 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 HSPA9P38646 679 aaKnown RBP18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 CDH8P55286 799 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 BPIFB4P59827 614 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 SRLQ86TD4 932 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 C12orf56Q8IXR9 622 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 MCOLN2Q8IZK6 566 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 REPS2Q8NFH8 660 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 PIK3R5Q8WYR1 880 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 MFSD14AQ96MC6 490 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 MCEEQ96PE7 176 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 APOL6Q9BWW8 343 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 C17orf75Q9HAS0 396 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 APOBEC3GQ9HC16 384 aaKnown RBP18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 ARHGAP28Q9P2N2 729 aa18.2■□□□□ 0.5
EPB41L3-204ENST00000540638 FOXO6A8MYZ6 492 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 VIMP08670 466 aaKnown RBP18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 LRRC14Q15048 493 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 ZNF699Q32M78 642 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 Q3C1V9 767 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 UBAP2Q5T6F2 1119 aaKnown RBP18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 B4GALNT4Q76KP1 1039 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 OTUD6BQ8N6M0 293 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 PCSK1NQ9UHG2 260 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 GOLGA8MH3BSY2 632 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 ARIH2O95376 493 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 COILP38432 576 aaPredicted RBP18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 LONRF1Q17RB8 773 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 RASGEF1CQ8N431 466 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 CHST13Q8NET6 341 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 EPS8L3Q8TE67 593 aaKnown RBP18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 VTI1AQ96AJ9 217 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 MMP19Q99542 508 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 CEP83Q9Y592 693 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 HMGB1P1B2RPK0 211 aaPredicted RBP18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 GAS8O95995 478 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 NAMPTP43490 491 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 RPL7AP62424 266 aaKnown RBP18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 DNAJC24Q6P3W2 148 aa18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.19■□□□□ 0.5
EPB41L3-204ENST00000540638 MPHOSPH6Q99547 160 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms