RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 PXNP49023 591 aaPredicted RBP13.33□□□□□ -0.28
YBX3-207ENST00000539204 RCAN1P53805 252 aa13.33□□□□□ -0.28
YBX3-207ENST00000539204 TCEAL6Q6IPX3 200 aa13.33□□□□□ -0.28
YBX3-207ENST00000539204 DHX32Q7L7V1 743 aaKnown RBP13.33□□□□□ -0.28
YBX3-207ENST00000539204 RALGPS2Q86X27 583 aaPredicted RBP13.33□□□□□ -0.28
YBX3-207ENST00000539204 C4orf19Q8IY42 314 aa13.33□□□□□ -0.28
YBX3-207ENST00000539204 ELMOD1Q8N336 334 aa13.33□□□□□ -0.28
YBX3-207ENST00000539204 ZSCAN18Q8TBC5 510 aaPredicted RBP13.33□□□□□ -0.28
YBX3-207ENST00000539204 TCEAL3Q969E4 200 aa13.33□□□□□ -0.28
YBX3-207ENST00000539204 TCEANC2Q96MN5 208 aa13.33□□□□□ -0.28
YBX3-207ENST00000539204 EDEM2Q9BV94 578 aa13.33□□□□□ -0.28
YBX3-207ENST00000539204 GPR88Q9GZN0 384 aa13.33□□□□□ -0.28
YBX3-207ENST00000539204 LSG1Q9H089 658 aaKnown RBP13.33□□□□□ -0.28
YBX3-207ENST00000539204 CYP4F11Q9HBI6 524 aa13.33□□□□□ -0.28
YBX3-207ENST00000539204 SPECC1L-ADORA2AF8WAN1 911 aa13.32□□□□□ -0.28
YBX3-207ENST00000539204 PTGESO14684 152 aa13.32□□□□□ -0.28
YBX3-207ENST00000539204 EXTL3O43909 919 aa13.32□□□□□ -0.28
YBX3-207ENST00000539204 AKAP3O75969 853 aa13.32□□□□□ -0.28
YBX3-207ENST00000539204 TDP2O95551 362 aa13.32□□□□□ -0.28
YBX3-207ENST00000539204 ATF2P15336 505 aa13.32□□□□□ -0.28
YBX3-207ENST00000539204 TCEAL8Q8IYN2 117 aa13.32□□□□□ -0.28
YBX3-207ENST00000539204 ETNPPLQ8TBG4 499 aa13.32□□□□□ -0.28
YBX3-207ENST00000539204 NFKBIZQ9BYH8 718 aa13.32□□□□□ -0.28
YBX3-207ENST00000539204 SNTG2Q9NY99 539 aa13.32□□□□□ -0.28
YBX3-207ENST00000539204 WRAP73Q9P2S5 460 aaPredicted RBP13.32□□□□□ -0.28
YBX3-207ENST00000539204 ATG13O75143 517 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 RHOBTB1O94844 696 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 CAVIN2O95810 425 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 CSRP1P21291 193 aaKnown RBP13.31□□□□□ -0.28
YBX3-207ENST00000539204 TKTP29401 623 aaKnown RBP13.31□□□□□ -0.28
YBX3-207ENST00000539204 RBM25P49756 843 aaKnown RBP13.31□□□□□ -0.28
YBX3-207ENST00000539204 ARPP19P56211 112 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 NLRP5P59047 1200 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 ROR1Q01973 937 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 CREB5Q02930 508 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 PPP2R5CQ13362 524 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 CCINQ13939 588 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 PON2Q15165 354 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 NAB2Q15742 525 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 PLK5Q496M5 336 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 WDR44Q5JSH3 913 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 RNF20Q5VTR2 975 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 SLC8B1Q6J4K2 584 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 TXNDC11Q6PKC3 985 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 LEMD2Q8NC56 503 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 TTC8Q8TAM2 541 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 SLITRK6Q9H5Y7 841 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 VPS54Q9P1Q0 977 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 DDX25Q9UHL0 483 aaKnown RBP13.31□□□□□ -0.28
YBX3-207ENST00000539204 SLC8A2Q9UPR5 921 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 AKAP13Q12802 2813 aa13.31□□□□□ -0.28
YBX3-207ENST00000539204 SPAG17Q6Q759 2223 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 TMEM189-UBE2V1I3L0A0 370 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 ZBTB39O15060 712 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 MOSPD3O75425 235 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 SEC24AO95486 1093 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 MYL4P12829 197 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 GJA1P17302 382 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 CTHP32929 405 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 FGD1P98174 961 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 FCHO2Q0JRZ9 810 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 CAPSQ13938 189 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 EPHA7Q15375 998 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 ELF2Q15723 593 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 MOXD1Q6UVY6 613 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 HS6ST3Q8IZP7 471 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 CAMKK1Q8N5S9 505 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 DDX27Q96GQ7 796 aaKnown RBP13.3□□□□□ -0.28
YBX3-207ENST00000539204 LXNQ9BS40 222 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 ZSWIM4Q9H7M6 989 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 XPNPEP1Q9NQW7 623 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 ASAH2Q9NR71 780 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 RGL1Q9NZL6 768 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 NEUROG3Q9Y4Z2 214 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 INSL5Q9Y5Q6 135 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 TICRRQ7Z2Z1 1910 aa13.3□□□□□ -0.28
YBX3-207ENST00000539204 IGFBP6P24592 240 aaPredicted RBP13.29□□□□□ -0.28
YBX3-207ENST00000539204 ARL2P36404 184 aa13.29□□□□□ -0.28
YBX3-207ENST00000539204 CLCNKBP51801 687 aa13.29□□□□□ -0.28
YBX3-207ENST00000539204 TEAD2Q15562 447 aa13.29□□□□□ -0.28
YBX3-207ENST00000539204 SOWAHCQ53LP3 525 aaPredicted RBP13.29□□□□□ -0.28
YBX3-207ENST00000539204 TPGS2Q68CL5 300 aa13.29□□□□□ -0.28
YBX3-207ENST00000539204 HAUS6Q7Z4H7 955 aa13.29□□□□□ -0.28
YBX3-207ENST00000539204 ASAP3Q8TDY4 903 aa13.29□□□□□ -0.28
YBX3-207ENST00000539204 FAM20AQ96MK3 541 aa13.29□□□□□ -0.28
YBX3-207ENST00000539204 DUSP15Q9H1R2 295 aaPredicted RBP13.29□□□□□ -0.28
YBX3-207ENST00000539204 CXCL16Q9H2A7 254 aa13.29□□□□□ -0.28
YBX3-207ENST00000539204 TMEM9BQ9NQ34 198 aa13.29□□□□□ -0.28
YBX3-207ENST00000539204 SH3GLB2Q9NR46 395 aa13.29□□□□□ -0.28
YBX3-207ENST00000539204 GTSE1Q9NYZ3 720 aa13.29□□□□□ -0.28
YBX3-207ENST00000539204 VAV3Q9UKW4 847 aa13.29□□□□□ -0.28
YBX3-207ENST00000539204 MSRB2Q9Y3D2 182 aa13.29□□□□□ -0.28
YBX3-207ENST00000539204 BCLAF3A2AJT9 711 aaKnown RBP13.28□□□□□ -0.28
YBX3-207ENST00000539204 H7C4K7 107 aa13.28□□□□□ -0.28
YBX3-207ENST00000539204 I3L4J1 428 aa13.28□□□□□ -0.28
YBX3-207ENST00000539204 DPYSL4O14531 572 aa13.28□□□□□ -0.28
YBX3-207ENST00000539204 DGAT1O75907 488 aa13.28□□□□□ -0.28
YBX3-207ENST00000539204 RECQL4O94761 1208 aa13.28□□□□□ -0.28
YBX3-207ENST00000539204 GLRA2P23416 452 aa13.28□□□□□ -0.28
YBX3-207ENST00000539204 BRCC3P46736 316 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms