RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 SYT2Q8N9I0 419 aaPredicted RBP10.59□□□□□ -0.71
CHD4-207ENST00000537634 TMEM161BQ8NDZ6 487 aa10.59□□□□□ -0.71
CHD4-207ENST00000537634 ITFG1Q8TB96 612 aa10.59□□□□□ -0.71
CHD4-207ENST00000537634 SPIRE2Q8WWL2 714 aa10.59□□□□□ -0.71
CHD4-207ENST00000537634 FGF14Q92915 247 aa10.59□□□□□ -0.71
CHD4-207ENST00000537634 NKD2Q969F2 451 aaPredicted RBP10.59□□□□□ -0.71
CHD4-207ENST00000537634 BICD1Q96G01 975 aa10.59□□□□□ -0.71
CHD4-207ENST00000537634 TMX3Q96JJ7 454 aa10.59□□□□□ -0.71
CHD4-207ENST00000537634 ZMAT2Q96NC0 199 aaKnown RBP10.59□□□□□ -0.71
CHD4-207ENST00000537634 PLIN2Q99541 437 aa10.59□□□□□ -0.71
CHD4-207ENST00000537634 NTPCRQ9BSD7 190 aaKnown RBP10.59□□□□□ -0.71
CHD4-207ENST00000537634 UPF2Q9HAU5 1272 aaKnown RBP10.59□□□□□ -0.71
CHD4-207ENST00000537634 HCFC1R1Q9NWW0 138 aa10.59□□□□□ -0.71
CHD4-207ENST00000537634 KCND2Q9NZV8 630 aa10.59□□□□□ -0.71
CHD4-207ENST00000537634 KCNH3Q9ULD8 1083 aa10.59□□□□□ -0.71
CHD4-207ENST00000537634 H0YCG3 227 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 SYN3O14994 580 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 CLDN3O15551 220 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 LRG1P02750 347 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 PLA2G4BP0C869 781 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 MAPTP10636 758 aaKnown RBP10.58□□□□□ -0.72
CHD4-207ENST00000537634 MCM4P33991 863 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 SLC12A3P55017 1021 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 ARPP19P56211 112 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 SPECC1Q5M775 1068 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 SLC8B1Q6J4K2 584 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 ZPBP2Q6X784 338 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 NPAS3Q8IXF0 933 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 ZNF461Q8TAF7 563 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 ING5Q8WYH8 240 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 C18orf25Q96B23 403 aaPredicted RBP10.58□□□□□ -0.72
CHD4-207ENST00000537634 SHDQ96IW2 340 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 ZBTB45Q96K62 511 aaPredicted RBP10.58□□□□□ -0.72
CHD4-207ENST00000537634 PNMA5Q96PV4 448 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 KXD1Q9BQD3 176 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 RPP25Q9BUL9 199 aaKnown RBP10.58□□□□□ -0.72
CHD4-207ENST00000537634 LARSQ9P2J5 1176 aaKnown RBP10.58□□□□□ -0.72
CHD4-207ENST00000537634 DNMT3BQ9UBC3 853 aaKnown RBP10.58□□□□□ -0.72
CHD4-207ENST00000537634 SMC3Q9UQE7 1217 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 MRPS23Q9Y3D9 190 aaKnown RBP10.58□□□□□ -0.72
CHD4-207ENST00000537634 SIT1Q9Y3P8 196 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 NOTCH4Q99466 2003 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 MIA3Q5JRA6 1907 aa10.58□□□□□ -0.72
CHD4-207ENST00000537634 ZFHX2Q9C0A1 2572 aaPredicted RBP10.58□□□□□ -0.72
CHD4-207ENST00000537634 ARHGEF37A1IGU5 675 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 WDR27A2RRH5 827 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 DCNP07585 359 aaKnown RBP10.57□□□□□ -0.72
CHD4-207ENST00000537634 RHOP08100 348 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 MCM2P49736 904 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 GPC5P78333 572 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 PFKPQ01813 784 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 MCL1Q07820 350 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 SLC10A6Q3KNW5 377 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 CTXN3Q4LDR2 81 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 TMEM119Q4V9L6 283 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 SEZ6Q53EL9 994 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 ZNF280DQ6N043 979 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 PJA1Q8NG27 643 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 RASSF8Q8NHQ8 419 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 CALML4Q96GE6 196 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 SUSD3Q96L08 255 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 AK8Q96MA6 479 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 CYP4F11Q9HBI6 524 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 FBXL5Q9UKA1 691 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 ODF2LQ9ULJ1 636 aa10.57□□□□□ -0.72
CHD4-207ENST00000537634 NPHP3-ACAD11A0A0J9YXS1 232 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 HNRNPDLO14979 420 aaKnown RBP10.56□□□□□ -0.72
CHD4-207ENST00000537634 MEFVO15553 781 aaPredicted RBP10.56□□□□□ -0.72
CHD4-207ENST00000537634 SLC26A4O43511 780 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 ABLIM3O94929 683 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 CD2BP2O95400 341 aaKnown RBP10.56□□□□□ -0.72
CHD4-207ENST00000537634 BMP15O95972 392 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 CLTAP09496 248 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 CXCL8P10145 99 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 ATF2P15336 505 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 PTPN2P17706 415 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 UBA7P41226 1012 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 LIG4P49917 911 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 NCKAP1LP55160 1127 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 STARD6P59095 220 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 PPP2R3AQ06190 1150 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 SNW1Q13573 536 aaKnown RBP10.56□□□□□ -0.72
CHD4-207ENST00000537634 MLF2Q15773 248 aaPredicted RBP10.56□□□□□ -0.72
CHD4-207ENST00000537634 SLC5A9Q2M3M2 681 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 TPGS2Q68CL5 300 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 HAUS6Q7Z4H7 955 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 GPBP1Q86WP2 473 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 TCEAL8Q8IYN2 117 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 ELMOD1Q8N336 334 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 APPL2Q8NEU8 664 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 MCRS1Q96EZ8 462 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 TBC1D32Q96NH3 1257 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 CORO1BQ9BR76 489 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 FOXQ1Q9C009 403 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 PLEKHA5Q9HAU0 1116 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 AVENQ9NQS1 362 aaPredicted RBP10.56□□□□□ -0.72
CHD4-207ENST00000537634 GDE1Q9NZC3 331 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 TUBGCP4Q9UGJ1 667 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 PCDHB8Q9UN66 801 aa10.56□□□□□ -0.72
CHD4-207ENST00000537634 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms