RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 TNNC2P02585 160 aa16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 ITGB3P05106 788 aa16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 KCNE1P15382 129 aa16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 IGFBP6P24592 240 aaPredicted RBP16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 MYL6P60660 151 aa16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 NCOA4Q13772 614 aa16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 CD302Q8IX05 232 aa16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 HACE1Q8IYU2 909 aa16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 HELQQ8TDG4 1101 aa16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 KAT5Q92993 513 aa16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 ANKRD36BP1Q96IX9 119 aa16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 TTYH3Q9C0H2 523 aa16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 PRKAG2Q9UGJ0 569 aa16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 GIT1Q9Y2X7 761 aa16.89■□□□□ 0.3
SFSWAP-206ENST00000537582 TRIP11Q15643 1979 aa16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 PMM2O15305 246 aa16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 P4HA2O15460 535 aa16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 EVI5O60447 810 aa16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 OFD1O75665 1012 aa16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 KRT19P08727 400 aa16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 CCDC173Q0VFZ6 552 aa16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 NAB2Q15742 525 aa16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 PHLDB3Q6NSJ2 640 aa16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 CRIPAKQ8N1N5 446 aa16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 RABGGTAQ92696 567 aa16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 TATDN2Q93075 761 aa16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 PGBD4Q96DM1 585 aa16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 PPP1R10Q96QC0 940 aaKnown RBP16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 APOBEC3GQ9HC16 384 aaKnown RBP16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 DPP3Q9NY33 737 aa16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 FHOD1Q9Y613 1164 aa16.89■□□□□ 0.29
SFSWAP-206ENST00000537582 B4GALT3O60512 393 aa16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 SKIP12755 728 aa16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 TRIM21P19474 475 aaKnown RBP16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 POLR2BP30876 1174 aaKnown RBP16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 CASP14P31944 242 aa16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 POLR2FP61218 127 aaKnown RBP16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 DEFB103AP81534 67 aa16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 IKBKEQ14164 716 aa16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 KLHDC7AQ5VTJ3 777 aa16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 RRAGAQ7L523 313 aa16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 OTOP2Q7RTS6 562 aa16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 NEK11Q8NG66 645 aa16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 RPS6KC1Q96S38 1066 aa16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 HTATIP2Q9BUP3 242 aa16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 NLRC4Q9NPP4 1024 aa16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 TMEM161AQ9NX61 479 aa16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 DERAQ9Y315 318 aa16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 LTBP2Q14767 1821 aa16.88■□□□□ 0.29
SFSWAP-206ENST00000537582 UPP2O95045 317 aa16.87■□□□□ 0.29
SFSWAP-206ENST00000537582 EOMESO95936 686 aa16.87■□□□□ 0.29
SFSWAP-206ENST00000537582 PNMA6AP0CW24 399 aaPredicted RBP16.87■□□□□ 0.29
SFSWAP-206ENST00000537582 AP3M2P53677 418 aa16.87■□□□□ 0.29
SFSWAP-206ENST00000537582 ADKP55263 362 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-206ENST00000537582 IQCEQ6IPM2 695 aa16.87■□□□□ 0.29
SFSWAP-206ENST00000537582 CCDC186Q7Z3E2 898 aa16.87■□□□□ 0.29
SFSWAP-206ENST00000537582 CACTINQ8WUQ7 758 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-206ENST00000537582 DPF3Q92784 378 aa16.87■□□□□ 0.29
SFSWAP-206ENST00000537582 XYLT2Q9H1B5 865 aa16.87■□□□□ 0.29
SFSWAP-206ENST00000537582 IL23AQ9NPF7 189 aa16.87■□□□□ 0.29
SFSWAP-206ENST00000537582 PLCB1Q9NQ66 1216 aa16.87■□□□□ 0.29
SFSWAP-206ENST00000537582 HCSTQ9UBK5 93 aa16.87■□□□□ 0.29
SFSWAP-206ENST00000537582 AGAP1Q9UPQ3 857 aa16.87■□□□□ 0.29
SFSWAP-206ENST00000537582 NUB1Q9Y5A7 615 aa16.87■□□□□ 0.29
SFSWAP-206ENST00000537582 PDCD11Q14690 1871 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-206ENST00000537582 UCHL3P15374 230 aa16.86■□□□□ 0.29
SFSWAP-206ENST00000537582 FPGSQ05932 587 aa16.86■□□□□ 0.29
SFSWAP-206ENST00000537582 CETN1Q12798 172 aa16.86■□□□□ 0.29
SFSWAP-206ENST00000537582 BEST2Q8NFU1 509 aa16.86■□□□□ 0.29
SFSWAP-206ENST00000537582 BAP1Q92560 729 aa16.86■□□□□ 0.29
SFSWAP-206ENST00000537582 ARID3AQ99856 593 aa16.86■□□□□ 0.29
SFSWAP-206ENST00000537582 PAAF1Q9BRP4 392 aa16.86■□□□□ 0.29
SFSWAP-206ENST00000537582 UBQLN1Q9UMX0 589 aaKnown RBP16.86■□□□□ 0.29
SFSWAP-206ENST00000537582 PCDHB7Q9Y5E2 793 aa16.86■□□□□ 0.29
SFSWAP-206ENST00000537582 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.86■□□□□ 0.295e-7■■■■□ 25.2
SFSWAP-206ENST00000537582 MICAL3Q7RTP6 2002 aa16.86■□□□□ 0.29
SFSWAP-206ENST00000537582 CLSTN1O94985 981 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 THP07101 528 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 WDR5P61964 334 aaKnown RBP16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 TRPC3Q13507 836 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 C9orf57Q5W0N0 161 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 E4F1Q66K89 784 aaPredicted RBP16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 GLB1LQ6UWU2 654 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 ZNF365Q70YC5 407 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 PPFIBP1Q86W92 1011 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 NT5DC4Q86YG4 428 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 TC2NQ8N9U0 490 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 KREMEN1Q96MU8 473 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 NAA15Q9BXJ9 866 aaKnown RBP16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 ELAC1Q9H777 363 aaKnown RBP16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 UBE2TQ9NPD8 197 aaPredicted RBP16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 APEX2Q9UBZ4 518 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 DNAJC12Q9UKB3 198 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 ITGA11Q9UKX5 1188 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 LRFN2Q9ULH4 789 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 POLIQ9UNA4 740 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 CASTOR2A6NHX0 329 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 MFAP3LO75121 409 aa16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 ASS1P00966 412 aaKnown RBP16.85■□□□□ 0.29
SFSWAP-206ENST00000537582 NOP14P78316 857 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms