RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 TRIM11Q96F44 468 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 IFT74Q96LB3 600 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 SERPINB12Q96P63 405 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 FNBP1Q96RU3 617 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 ARHGAP28Q9P2N2 729 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 O00370 1275 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 SORBS3O60504 671 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 DKC1O60832 514 aaKnown RBP eCLIP15.26■□□□□ 0.03
USP44-203ENST00000537435 GAS8O95995 478 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 HLA-DRAP01903 254 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 CYP1A1P04798 512 aaPredicted RBP15.26■□□□□ 0.03
USP44-203ENST00000537435 ATF2P15336 505 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 VPS41P49754 854 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 LIG4P49917 911 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 WNT7BP56706 349 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 CENPCQ03188 943 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 XRRA1Q6P2D8 792 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 CCDC50Q8IVM0 306 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 CCDC60Q8IWA6 550 aaPredicted RBP15.26■□□□□ 0.03
USP44-203ENST00000537435 HEMGNQ9BXL5 484 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 POLR3FQ9H1D9 316 aaPredicted RBP15.26■□□□□ 0.03
USP44-203ENST00000537435 ATP6V0A4Q9HBG4 840 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 CYP26B1Q9NR63 512 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 HOMER3Q9NSC5 361 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 EXTL3O43909 919 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 PROSCO94903 275 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 PSAPP07602 524 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 CREB1P16220 341 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 RTP1P59025 263 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 BPIFB4P59827 614 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 PRKCEQ02156 737 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 LRRC14Q15048 493 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 KYNUQ16719 465 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 ZACNQ401N2 412 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 TDRD10Q5VZ19 366 aaKnown RBP15.25■□□□□ 0.03
USP44-203ENST00000537435 CYB5D1Q6P9G0 228 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 MON1BQ7L1V2 547 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 ATL2Q8NHH9 583 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 MGARPQ8TDB4 240 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 NSRP1Q9H0G5 558 aaKnown RBP15.25■□□□□ 0.03
USP44-203ENST00000537435 CTNNAL1Q9UBT7 734 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 MAFGO15525 162 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 RGS20O76081 388 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 TTC4O95801 387 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 C4BPAP04003 597 aaKnown RBP15.25■□□□□ 0.03
USP44-203ENST00000537435 CFHP08603 1231 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 RALAP11233 206 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 ADCY8P40145 1251 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 PIK3CAP42336 1068 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 ACOT2P49753 483 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 NLRP11P59045 1033 aaKnown RBP15.25■□□□□ 0.03
USP44-203ENST00000537435 PSMD6Q15008 389 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 PASD1Q8IV76 773 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 DYDC1Q8WWB3 177 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 PWWP2AQ96N64 755 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 FAM118BQ9BPY3 351 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 C11orf70Q9BRQ4 267 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 CD248Q9HCU0 757 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 ANAPC5Q9UJX4 755 aa15.25■□□□□ 0.03
USP44-203ENST00000537435 DNAJC8O75937 253 aaPredicted RBP15.24■□□□□ 0.03
USP44-203ENST00000537435 CLDN10P78369 228 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 KLF1Q13351 362 aaPredicted RBP15.24■□□□□ 0.03
USP44-203ENST00000537435 MTERF2Q49AM1 385 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 SCLT1Q96NL6 688 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 TRAIPQ9BWF2 469 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 KIAA1586Q9HCI6 787 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 JPH1Q9HDC5 661 aaPredicted RBP15.24■□□□□ 0.03
USP44-203ENST00000537435 UMODL1Q5DID0 1318 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 TMEM120BA0PK00 339 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 THAP12O43422 761 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 EGFRP00533 1210 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 ATP5DP30049 168 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 SSTR3P32745 418 aaPredicted RBP15.24■□□□□ 0.03
USP44-203ENST00000537435 DSG3P32926 999 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 TAS2R40P59535 323 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 CAV1Q03135 178 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 PTPRJQ12913 1337 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 PTP4A2Q12974 167 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 XRCC4Q13426 336 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 VSTM1Q6UX27 236 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 TAX1BP1Q86VP1 789 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 SGSM3Q96HU1 749 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 SLC9A2Q9UBY0 812 aa15.24■□□□□ 0.03
USP44-203ENST00000537435 H0YCG3 227 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 CHUKO15111 745 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 VNN1O95497 513 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 FDX1P10109 184 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 DPEP1P16444 411 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 ACO1P21399 889 aaKnown RBP15.23■□□□□ 0.03
USP44-203ENST00000537435 GJC1P36383 396 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 ACTR2P61160 394 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 LIN9Q5TKA1 542 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.23■□□□□ 0.03
USP44-203ENST00000537435 RHOT1Q8IXI2 618 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 PARP9Q8IXQ6 854 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.23■□□□□ 0.03
USP44-203ENST00000537435 APOBEC3GQ9HC16 384 aaKnown RBP15.23■□□□□ 0.03
USP44-203ENST00000537435 NINJ2Q9NZG7 142 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 ADAM22Q9P0K1 906 aa15.23■□□□□ 0.03
USP44-203ENST00000537435 AGO2Q9UKV8 859 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms