RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.81□□□□□ -1.32
SOX6-216ENST00000533658 NOP56O00567 594 aaKnown RBP6.81□□□□□ -1.32
SOX6-216ENST00000533658 DCXO43602 365 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 PPFIA4O75335 1185 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 GJB5O95377 273 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 GHRP10912 638 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 ALADP13716 330 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 ERVK-21P61565 698 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 GHRHRQ02643 423 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 TMEM62Q0P6H9 643 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 NKPD1Q17RQ9 610 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 ADCK5Q3MIX3 580 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 ZBTB37Q5TC79 503 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 CREB3L3Q68CJ9 461 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 HEATR3Q7Z4Q2 680 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 LMBR1Q8WVP7 490 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 RUFY2Q8WXA3 655 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 RRP36Q96EU6 259 aaKnown RBP6.81□□□□□ -1.32
SOX6-216ENST00000533658 INPP4AQ96PE3 977 aaPredicted RBP6.81□□□□□ -1.32
SOX6-216ENST00000533658 KCNC2Q96PR1 638 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 TGS1Q96RS0 853 aaKnown RBP6.81□□□□□ -1.32
SOX6-216ENST00000533658 RAD9AQ99638 391 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 DUSP9Q99956 384 aaKnown RBP6.81□□□□□ -1.32
SOX6-216ENST00000533658 CARS2Q9HA77 564 aaKnown RBP6.81□□□□□ -1.32
SOX6-216ENST00000533658 TMEM260Q9NX78 707 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 CACNA1HO95180 2353 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 ZDBF2Q9HCK1 2354 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 DOCK5Q9H7D0 1870 aa6.81□□□□□ -1.32
SOX6-216ENST00000533658 MYO15AQ9UKN7 3530 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 KIAA1217Q5T5P2 1943 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 GSTTP1A0A1W2PQM5 241 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 PRAMEF27A3QJZ7 478 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 CCDC69A6NI79 296 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 H3BQ06 376 aaPredicted RBP6.8□□□□□ -1.32
SOX6-216ENST00000533658 DDX39AO00148 427 aaKnown RBP6.8□□□□□ -1.32
SOX6-216ENST00000533658 CHRNA1P02708 482 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 TCF7P36402 384 aaPredicted RBP6.8□□□□□ -1.32
SOX6-216ENST00000533658 GATMP50440 423 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 CLCN7P51798 805 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 ETF1P62495 437 aaKnown RBP6.8□□□□□ -1.32
SOX6-216ENST00000533658 RBL2Q08999 1139 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 SKOR2Q2VWA4 1001 aaPredicted RBP6.8□□□□□ -1.32
SOX6-216ENST00000533658 PLEKHG4Q58EX7 1191 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 WWC2Q6AWC2 1192 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 CASC1Q6TDU7 716 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 EP400NLQ6ZTU2 488 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 FAM214BQ7L5A3 538 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 TRMT1LQ7Z2T5 733 aaKnown RBP6.8□□□□□ -1.32
SOX6-216ENST00000533658 CTCFLQ8NI51 663 aaPredicted RBP6.8□□□□□ -1.32
SOX6-216ENST00000533658 NEK9Q8TD19 979 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 PCYT2Q99447 389 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 KATNAL1Q9BW62 490 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 FAM49AQ9H0Q0 323 aaPredicted RBP6.8□□□□□ -1.32
SOX6-216ENST00000533658 NAP1L2Q9ULW6 460 aaPredicted RBP6.8□□□□□ -1.32
SOX6-216ENST00000533658 MYH6P13533 1939 aa6.8□□□□□ -1.32
SOX6-216ENST00000533658 FRMPD4Q14CM0 1322 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 VPS13AQ96RL7 3174 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 ABHD14A-ACY1A0A1B0GW23 586 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 FIBPO43427 364 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 DDAH1O94760 285 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 ARP10275 920 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 SRFP11831 508 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 KCNA2P16389 499 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 HOXC8P31273 242 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 ICAM3P32942 547 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 GTF2F1P35269 517 aaKnown RBP eCLIP6.79□□□□□ -1.32
SOX6-216ENST00000533658 RPS26P62854 115 aaKnown RBP6.79□□□□□ -1.32
SOX6-216ENST00000533658 RING1Q06587 406 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 PSMD2Q13200 908 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 SART3Q15020 963 aaKnown RBP6.79□□□□□ -1.32
SOX6-216ENST00000533658 NECTIN1Q15223 517 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 CLUL1Q15846 466 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 MARCH8Q5T0T0 291 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 METTL7BQ6UX53 244 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 TMTC3Q6ZXV5 915 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 CXorf38Q8TB03 319 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 DNAJB3Q8WWF6 145 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 KCNN1Q92952 543 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 MRPL38Q96DV4 380 aaKnown RBP6.79□□□□□ -1.32
SOX6-216ENST00000533658 MRRFQ96E11 262 aaKnown RBP6.79□□□□□ -1.32
SOX6-216ENST00000533658 SPZ1Q9BXG8 430 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 IFIH1Q9BYX4 1025 aaKnown RBP6.79□□□□□ -1.32
SOX6-216ENST00000533658 KCNH6Q9H252 994 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 PSTPIP2Q9H939 334 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 SEC63Q9UGP8 760 aaKnown RBP6.79□□□□□ -1.32
SOX6-216ENST00000533658 PCDHA6Q9UN73 950 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 PCDHA8Q9Y5H6 950 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 MYH7BA7E2Y1 1941 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 CACNA1AO00555 2505 aa6.79□□□□□ -1.32
SOX6-216ENST00000533658 DCHS1Q96JQ0 3298 aa6.78□□□□□ -1.32
SOX6-216ENST00000533658 EFCAB14O75071 495 aa6.78□□□□□ -1.32
SOX6-216ENST00000533658 LRIG2O94898 1065 aa6.78□□□□□ -1.32
SOX6-216ENST00000533658 AMHP03971 560 aa6.78□□□□□ -1.32
SOX6-216ENST00000533658 TGFB3P10600 412 aa6.78□□□□□ -1.32
SOX6-216ENST00000533658 CD52P31358 61 aa6.78□□□□□ -1.32
SOX6-216ENST00000533658 MCM5P33992 734 aa6.78□□□□□ -1.32
SOX6-216ENST00000533658 ADAM17P78536 824 aa6.78□□□□□ -1.32
SOX6-216ENST00000533658 PPFIA1Q13136 1202 aa6.78□□□□□ -1.32
SOX6-216ENST00000533658 ITGB3BPQ13352 177 aaPredicted RBP6.78□□□□□ -1.32
SOX6-216ENST00000533658 MTMR1Q13613 665 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms