RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 DTWD2Q8NBA8 298 aa10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 KCNG4Q8TDN1 519 aa10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 GPR152Q8TDT2 470 aa10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 DDX27Q96GQ7 796 aaKnown RBP10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 ACAP3Q96P50 834 aa10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 CLSTN3Q9BQT9 956 aa10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 TIPINQ9BVW5 301 aa10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 TMEM134Q9H6X4 195 aa10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 TBC1D17Q9HA65 648 aa10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 C17orf75Q9HAS0 396 aa10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 POLD4Q9HCU8 107 aa10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 ARHGEF3Q9NR81 526 aa10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 CDH7Q9ULB5 785 aa10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 USP20Q9Y2K6 914 aa10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 RBM19Q9Y4C8 960 aaKnown RBP10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 CDY1Q9Y6F8 540 aa10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 NUMBLQ9Y6R0 609 aa10.56□□□□□ -0.72
PPFIA1-223ENST00000532793 DOCK6Q96HP0 2047 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 PRR23AA6NEV1 266 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 E9PMD0 336 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 H3BQV1 296 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 PRRG1O14668 218 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 PI15O43692 258 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 HIP1RO75146 1068 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 HARSP12081 509 aaKnown RBP10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 NPR3P17342 541 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 FGFR3P22607 806 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 U2AF2P26368 475 aaKnown RBP eCLIP10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 PRPHP41219 470 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 GRM5P41594 1212 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 NPTX2P47972 431 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 PFKPQ01813 784 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 HTR4Q13639 388 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 RAB33AQ14088 237 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 PABPC1LQ4VXU2 614 aaKnown RBP10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 RILPL1Q5EBL4 403 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 ZC3H14Q6PJT7 736 aaKnown RBP10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 RTL10Q7L3V2 364 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 FRMD5Q7Z6J6 570 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 ELMOD1Q8N336 334 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 IGSF22Q8N9C0 903 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 PPP1R10Q96QC0 940 aaKnown RBP10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 UPF2Q9HAU5 1272 aaKnown RBP10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 SLC2A4RGQ9NR83 387 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 MTRRQ9UBK8 725 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 SIT1Q9Y3P8 196 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 PCDHB6Q9Y5E3 794 aa10.55□□□□□ -0.72
PPFIA1-223ENST00000532793 SMIM28A0A1B0GU29 152 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 KRBA1A5PL33 1030 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 ANHXE9PGG2 379 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 H0YCG3 227 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 H7C4K7 107 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 PAPLNO95428 1278 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 MCF2P10911 925 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 TKTP29401 623 aaKnown RBP10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 MCM4P33991 863 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 ARPP19P56211 112 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 NAB2Q15742 525 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 ECM1Q16610 540 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 UPP1Q16831 310 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 NT5DC1Q5TFE4 455 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 PHLDB3Q6NSJ2 640 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 MPZL3Q6UWV2 235 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 ASCL5Q7RTU5 278 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 RASSF8Q8NHQ8 419 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 FGF13Q92913 245 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 BICD1Q96G01 975 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 ACO2Q99798 780 aaKnown RBP10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 HINFPQ9BQA5 517 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 CDT1Q9H211 546 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 GOLGA2P5Q9HBQ8 144 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 ANKFY1Q9P2R3 1169 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 MRPS23Q9Y3D9 190 aaKnown RBP10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 BACE2Q9Y5Z0 518 aa10.54□□□□□ -0.72
PPFIA1-223ENST00000532793 I3L4J1 428 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 PODXLO00592 558 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 SYN3O14994 580 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 SLC16A4O15374 487 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 ST8SIA5O15466 376 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 EDN1P05305 212 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 POU2F2P09086 479 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 MARCKSP29966 332 aaPredicted RBP10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 BRCC3P46736 316 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 NTHL1P78549 312 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 NOLC1Q14978 699 aaKnown RBP eCLIP10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 RINT1Q6NUQ1 792 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 PARM1Q6UWI2 310 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 KCTD17Q8N5Z5 321 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 C4orf32Q8N8J7 132 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 CEP120Q8N960 986 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 ST13P5Q8NFI4 369 aaPredicted RBP10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 ZNF461Q8TAF7 563 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 FGF14Q92915 247 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 SNX27Q96L92 541 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 TARS2Q9BW92 718 aaKnown RBP10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 BCO2Q9BYV7 579 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 CXCL16Q9H2A7 254 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 SEMA4AQ9H3S1 761 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 KCND2Q9NZV8 630 aa10.53□□□□□ -0.72
PPFIA1-223ENST00000532793 KCNH3Q9ULD8 1083 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms