RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 ACCSLQ4AC99 568 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 CENPUQ71F23 418 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 TLCD1Q96CP7 247 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 MSTO1Q9BUK6 570 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 TRIM6Q9C030 488 aaPredicted RBP12.03□□□□□ -0.48
NXF1-211ENST00000531709 QTRT2Q9H974 415 aaKnown RBP12.03□□□□□ -0.48
NXF1-211ENST00000531709 GRHL1Q9NZI5 618 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 P4HA2O15460 535 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 TJP3O95049 919 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 ITGB5P18084 799 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 MSH2P43246 934 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 FMO1Q01740 532 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 RRP1BQ14684 758 aaKnown RBP12.03□□□□□ -0.48
NXF1-211ENST00000531709 CCDC62Q6P9F0 684 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 CCHCR1Q8TD31 782 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 SPIRE2Q8WWL2 714 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 TMEM143Q96AN5 459 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 GLIS2Q9BZE0 524 aaPredicted RBP12.03□□□□□ -0.48
NXF1-211ENST00000531709 PCSK1NQ9UHG2 260 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 HAO1Q9UJM8 370 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 COL4A1P02462 1669 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 IGLV3-22A0A075B6J6 115 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 SRRM3A6NNA2 597 aaPredicted RBP12.03□□□□□ -0.48
NXF1-211ENST00000531709 RGL2O15211 777 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 DKC1O60832 514 aaKnown RBP eCLIP12.03□□□□□ -0.48
NXF1-211ENST00000531709 STAM2O75886 525 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 CYP3A4P08684 503 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 GHRP10912 638 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 PHBP35232 272 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 DRG2P55039 364 aaKnown RBP12.03□□□□□ -0.48
NXF1-211ENST00000531709 RPS6P62753 249 aaKnown RBP12.03□□□□□ -0.48
NXF1-211ENST00000531709 STAT4Q14765 748 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 TSNAXIP1Q2TAA8 658 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 TKFCQ3LXA3 575 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 PREPLQ4J6C6 727 aaPredicted RBP12.03□□□□□ -0.48
NXF1-211ENST00000531709 SCYL2Q6P3W7 929 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 C6orf89Q6UWU4 347 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 SEMA4DQ92854 862 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 TTC17Q96AE7 1141 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 KREMEN1Q96MU8 473 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 MTFR1LQ9H019 292 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 NPHS2Q9NP85 383 aa12.03□□□□□ -0.48
NXF1-211ENST00000531709 CFAP69A5D8W1 941 aa12.02□□□□□ -0.48
NXF1-211ENST00000531709 EEPD1Q7L9B9 569 aa12.02□□□□□ -0.48
NXF1-211ENST00000531709 IL31RAQ8NI17 732 aa12.02□□□□□ -0.48
NXF1-211ENST00000531709 AGAP11Q8TF27 550 aa12.02□□□□□ -0.48
NXF1-211ENST00000531709 CENPTQ96BT3 561 aa12.02□□□□□ -0.48
NXF1-211ENST00000531709 PCDHB2Q9Y5E7 798 aa12.02□□□□□ -0.48
NXF1-211ENST00000531709 ZSCAN5DPP0CG00 497 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 RAD23BP54727 409 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 OVGP1Q12889 678 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 SMTNL2Q2TAL5 461 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 C6orf163Q5TEZ5 329 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 PARD3BQ8TEW8 1205 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 CNKSR1Q969H4 720 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 RILPQ96NA2 401 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 TMEM237Q96Q45 408 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 WHRNQ9P202 907 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 PCDHA10Q9Y5I2 948 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 ATXN2Q99700 1313 aaKnown RBP12.02□□□□□ -0.49
NXF1-211ENST00000531709 ENTPD3O75355 529 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 DNAJC8O75937 253 aaPredicted RBP12.02□□□□□ -0.49
NXF1-211ENST00000531709 HLA-DRAP01903 254 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 VIL1P09327 827 aaKnown RBP12.02□□□□□ -0.49
NXF1-211ENST00000531709 PTGIRP43119 386 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 RCN2Q14257 317 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 ATP13A4Q4VNC1 1196 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 PPFIBP2Q8ND30 876 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 SLC7A3Q8WY07 619 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 ART4Q93070 314 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 NUDCD1Q96RS6 583 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 POLR3FQ9H1D9 316 aaPredicted RBP12.02□□□□□ -0.49
NXF1-211ENST00000531709 RBAKQ9NYW8 714 aaPredicted RBP12.02□□□□□ -0.49
NXF1-211ENST00000531709 NINJ2Q9NZG7 142 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 TMX2Q9Y320 296 aa12.02□□□□□ -0.49
NXF1-211ENST00000531709 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.01□□□□□ -0.49
NXF1-211ENST00000531709 JAG1P78504 1218 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 RFX6Q8HWS3 928 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 SIAH1Q8IUQ4 282 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 MCEEQ96PE7 176 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 ZFP69BQ9UJL9 534 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 AGO2Q9UKV8 859 aaKnown RBP12.01□□□□□ -0.49
NXF1-211ENST00000531709 PLIN4Q96Q06 1357 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 A8MUI8 341 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 MT-ND3P03897 115 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 SRGAP2CP0DJJ0 459 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 JAK3P52333 1124 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 FAM71AQ8IYT1 594 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 MBOAT7Q96N66 472 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 YIPF3Q9GZM5 350 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 UBN1Q9NPG3 1134 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 SCINQ9Y6U3 715 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 INHBAP08476 426 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 SLC1A1P43005 524 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 IRX4P78413 519 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 XRCC4Q13426 336 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 BAATQ14032 418 aaPredicted RBP12.01□□□□□ -0.49
NXF1-211ENST00000531709 DACT2Q5SW24 774 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 BSPRYQ5W0U4 402 aa12.01□□□□□ -0.49
NXF1-211ENST00000531709 ERICH1Q86X53 443 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms