RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 ARHGEF35A5YM69 484 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 HRO43593 1189 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 GDF9O60383 454 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 NEMFO60524 1076 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 LYPLA2O95372 231 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 RETP07949 1114 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 ADRB1P08588 477 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 XRCC6P12956 609 aaKnown RBP eCLIP10.16□□□□□ -0.78
NEDD8-206ENST00000531430 PSMC3P17980 439 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 MARCKSP29966 332 aaPredicted RBP10.16□□□□□ -0.78
NEDD8-206ENST00000531430 CCR3P51677 355 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 YARSP54577 528 aaKnown RBP10.16□□□□□ -0.78
NEDD8-206ENST00000531430 SATB1Q01826 763 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 ROR1Q01973 937 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 LAIR1Q6GTX8 287 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 PADI6Q6TGC4 694 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 BSNDQ8WZ55 320 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 WASF1Q92558 559 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 DNASE1L2Q92874 299 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 DDX27Q96GQ7 796 aaKnown RBP10.16□□□□□ -0.78
NEDD8-206ENST00000531430 IFT74Q96LB3 600 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 ZSWIM3Q96MP5 696 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 KIFC3Q9BVG8 833 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 PRMT8Q9NR22 394 aaPredicted RBP10.16□□□□□ -0.78
NEDD8-206ENST00000531430 SEMA4GQ9NTN9 838 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 SDK1Q7Z5N4 2213 aa10.16□□□□□ -0.78
NEDD8-206ENST00000531430 SMIM28A0A1B0GU29 152 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 CCDC169A6NNP5 214 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 BTBD18B2RXH4 712 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 H7C4K7 107 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 K7ERI5 159 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 NRG2O14511 850 aaPredicted RBP10.15□□□□□ -0.78
NEDD8-206ENST00000531430 AXIN1O15169 862 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 MED24O75448 989 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 SEC24AO95486 1093 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 HARSP12081 509 aaKnown RBP10.15□□□□□ -0.78
NEDD8-206ENST00000531430 MCM7P33993 719 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 DMWDQ09019 674 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 TWF1Q12792 350 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 TRIM29Q14134 588 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 NAB2Q15742 525 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 UPP1Q16831 310 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 FAM187BQ17R55 369 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 DCAF4L1Q3SXM0 396 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 CTXN3Q4LDR2 81 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 ATF7IP2Q5U623 682 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 IL31Q6EBC2 164 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 VITQ6UXI7 678 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 RTL10Q7L3V2 364 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 APBB1IPQ7Z5R6 666 aaPredicted RBP10.15□□□□□ -0.78
NEDD8-206ENST00000531430 CATSPER3Q86XQ3 398 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 NECAB1Q8N987 351 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 ZSCAN18Q8TBC5 510 aaPredicted RBP10.15□□□□□ -0.78
NEDD8-206ENST00000531430 FAM200AQ8TCP9 573 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 NETO1Q8TDF5 533 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 NELL1Q92832 810 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 SMARCD2Q92925 531 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 UROC1Q96N76 676 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 CCDC94Q9BW85 323 aaPredicted RBP10.15□□□□□ -0.78
NEDD8-206ENST00000531430 CHRDQ9H2X0 955 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 RBM12Q9NTZ6 932 aaKnown RBP10.15□□□□□ -0.78
NEDD8-206ENST00000531430 F5P12259 2224 aa10.15□□□□□ -0.78
NEDD8-206ENST00000531430 NOTCH4Q99466 2003 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 WDR27A2RRH5 827 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 SLC38A8A6NNN8 435 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 HEPACAM2A8MVW5 462 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 PODXLO00592 558 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 SLC30A4O14863 429 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 EDN1P05305 212 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 POU2F2P09086 479 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 SPATA31C1P0DKV0 1188 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 ATF2P15336 505 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 CYP11B2P19099 503 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 CCR2P41597 374 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 NAMPTP43490 491 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 SOX9P48436 509 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 PPP2R5AQ15172 486 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 TEAD2Q15562 447 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 CCDC6Q16204 474 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 AASDHQ4L235 1098 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-206ENST00000531430 NT5DC1Q5TFE4 455 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 CDCA2Q69YH5 1023 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-206ENST00000531430 CD300LGQ6UXG3 332 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 PRR23CQ6ZRP0 262 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 C3orf58Q8NDZ4 430 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 ERMNQ8TAM6 284 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 ASB16Q96NS5 453 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 PPP1R10Q96QC0 940 aaKnown RBP10.14□□□□□ -0.79
NEDD8-206ENST00000531430 TUFT1Q9NNX1 390 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 ASAH2Q9NR71 780 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 FBXL5Q9UKA1 691 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 RALYQ9UKM9 306 aaKnown RBP10.14□□□□□ -0.79
NEDD8-206ENST00000531430 TPCN1Q9ULQ1 816 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 INSL5Q9Y5Q6 135 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 RALGAPA1Q6GYQ0 2036 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 CHD8Q9HCK8 2581 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 ZMYM2Q9UBW7 1377 aa10.14□□□□□ -0.79
NEDD8-206ENST00000531430 MAP1BP46821 2468 aaKnown RBP10.13□□□□□ -0.79
NEDD8-206ENST00000531430 PATJQ8NI35 1801 aa10.13□□□□□ -0.79
NEDD8-206ENST00000531430 ARHGEF37A1IGU5 675 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms